prot_Ecto-sp13_S_contig5507.15762.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5507.15762.1
Unique Nameprot_Ecto-sp13_S_contig5507.15762.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length228
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5507.15762.1 vs. uniprot
Match: D8LSJ5_ECTSI (Erf4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ5_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 3.040e-111
Identity = 193/227 (85.02%), Postives = 196/227 (86.34%), Query Frame = 0 
Query:    1 MAAIQENEGGDLGVIRLEPIGIKLGATGAYVAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGAKVGAPPXXXXXXXXGDAARGSSLGSPSAVGGSGATTGPSREREQPYSADKGXXXXXXXXXXXXXXTSGAMQPLGEALLEPGSAAEEARGY 227
            MAAIQE+E G LGVIRLEPIGIKLGATG   AYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYG+KVGAP XXXXXXXX                     TGPSREREQPYSA   XXXXXXXXXXXXXX SGAMQPLGEALLEPG+AAEEARGY
Sbjct:    1 MAAIQEHEAGVLGVIRLEPIGIKLGATGISSAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGSKVGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGPSREREQPYSAXXXXXXXXXXXXXXXXXXSGAMQPLGEALLEPGNAAEEARGY 227
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BLAST of mRNA_Ecto-sp13_S_contig5507.15762.1 vs. uniprot
Match: A0A1V9Z5W3_9STRA (Erf4 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5W3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.320e-8
Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 0 
Query:   15 IRLEPIGIKLGATGAYVAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQ 109
            +RL P+ ++    G   AYDD++PPEL G +   ++   I +IN  L D +PC  C    Y  C CT GLSLL       + E+    ++  +NQ
Sbjct:    7 VRLMPMHMRF-VNGISRAYDDEFPPELQGRVDETQFTHAINQINNTLTDYWPCLFCVCYGYACCICTGGLSLLCPHMCISDAEQYARTLIDRINQ 100
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BLAST of mRNA_Ecto-sp13_S_contig5507.15762.1 vs. uniprot
Match: A0A024U2C1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2C1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.260e-6
Identity = 29/99 (29.29%), Postives = 54/99 (54.55%), Query Frame = 0 
Query:   37 YPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFC--SAWVQV 133
            +PPE++ +M+ E++ + +  IN+AL D +PC  C   +Y  C CTLGLSL     +  E E+     +  VN+    R R + +   +++   ++W+ +
Sbjct:   42 FPPEIEVYMSKEDFDKALETINQALHDLWPCVPCWSTSYGCCICTLGLSLYCAWGQVSEAEKCAARQIARVNRRPCFRDRHITWQLEKSWLKHTSWLVI 140
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5507.15762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSJ5_ECTSI3.040e-11185.02Erf4 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A1V9Z5W3_9STRA1.320e-834.74Erf4 domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A024U2C1_9STRA4.260e-629.29Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019383Golgin subfamily A member 7/ERF4PFAMPF10256Erf4coord: 30..118
e-value: 1.4E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5507contigEcto-sp13_S_contig5507:905..5192 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5507.15762.1mRNA_Ecto-sp13_S_contig5507.15762.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5507 905..5839 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5507.15762.1 ID=prot_Ecto-sp13_S_contig5507.15762.1|Name=mRNA_Ecto-sp13_S_contig5507.15762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp
MAAIQENEGGDLGVIRLEPIGIKLGATGAYVAYDDQYPPELDGWMTTEEW
FECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGV
GEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGAKVGAPPPPLLPAA
AGDAARGSSLGSPSAVGGSGATTGPSREREQPYSADKGGGGRKAAPTTVA
ATTSGAMQPLGEALLEPGSAAEEARGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019383Golgin_A_7/ERF4