prot_Ecto-sp13_S_contig5505.15760.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5505.15760.1
Unique Nameprot_Ecto-sp13_S_contig5505.15760.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length458
Homology
BLAST of mRNA_Ecto-sp13_S_contig5505.15760.1 vs. uniprot
Match: D7FR08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR08_ECTSI)

HSP 1 Score: 593 bits (1530), Expect = 6.840e-193
Identity = 305/346 (88.15%), Postives = 315/346 (91.04%), Query Frame = 0
Query:   79 MSTA---SYXXXXXXXXXXGSTAPGGDLGGRRGGAANSGDISHRTIRDAVRAHAPKEEGGFLGVDEYVVHLYDKYAEGGGMLSRKTFAQVIAEIVGEDGLTPVELGDAFDWFQKASGVQGGISFDAFLQGNLMSEDERRETAGKLRSKIKKKFGKRDDQLRELFDFMAEPNRGDHASARVLCEVVDEWLKVDIAEEEAISVLQMMDLDRDGAVSVDDFMGFMGPQGEEVVEATSLAARLGSAIVDIEVSTSKDQEHELEQSGYKVVDANVNAGTLGPPIHVWYRRLKHGGAGMRLKPLVDVVVDHKNVNSALVVDGYQCIDRSLSKGTPLGASNYLWVRRAMTEEE 421
            MSTA   SY          GSTAPGGDLGGRRGGA NSG++SHRTIRDAVRAHAPKEEGGFLGVDEYVVHLYDKYAEGGGMLSRKTFAQVIAEI+G+DGLT +EL DAFDWFQKASGVQGGIS DAFL+GNLMSEDERRETAGKLRSKIKKKFGKRDDQLRELFDFMAEPNRGDHASARVLCEVVDEWLKVDIAE EAISVLQMMDLDRDGAVSVDDFMGFMGPQGEEVVEATSLAARLGSAIVDIEVSTSKDQEHELEQSGYKVVDANVNAGTLGPPIHVWYRRLKHGGAGMRLKPLVDVVVDHKNVNSALVVDGYQCIDRSLSK      +    V   +T+E+
Sbjct:    1 MSTAKRPSYAATASAAAVSGSTAPGGDLGGRRGGATNSGEVSHRTIRDAVRAHAPKEEGGFLGVDEYVVHLYDKYAEGGGMLSRKTFAQVIAEILGQDGLTAMELDDAFDWFQKASGVQGGISVDAFLEGNLMSEDERRETAGKLRSKIKKKFGKRDDQLRELFDFMAEPNRGDHASARVLCEVVDEWLKVDIAEPEAISVLQMMDLDRDGAVSVDDFMGFMGPQGEEVVEATSLAARLGSAIVDIEVSTSKDQEHELEQSGYKVVDANVNAGTLGPPIHVWYRRLKHGGAGMRLKPLVDVVVDHKNVNSALVVDGYQCIDRSLSKPNAFTGTQAFRVASTLTDEK 346          
BLAST of mRNA_Ecto-sp13_S_contig5505.15760.1 vs. uniprot
Match: A0A836CEX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX3_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.940e-33
Identity = 78/196 (39.80%), Postives = 120/196 (61.22%), Query Frame = 0
Query:  183 AFDWFQKASGVQGGISFDAFLQGNLMSEDERRETAGKLRSKIKKKFGKRDDQLRELFDFMAEPNRGDHASARVLCEVVDEWLKVDIAEEEAISVLQMMDLDRDGAVSVDDFMGFMGPQGEEVVEATSLAARLGSAIVDIE-----------VSTSKDQE-----HELEQSGYKVVDANVNAGTLGPPIHVWYRRLK 362
            AFD  Q      G ++ + F++G L+ E E ++    LR  + KKFGKR+  LREL+D ++ PNR +  S   +C+++ EW+ +D++E E ++   +MDLD+DGAVS+DDFMGFMG QGE++V   S+A+RL SAIVDI+           ++T K ++     H    +G+  V  N+N  T+G  I +WYR +K
Sbjct:   63 AFDLLQF-----GFVTDEEFVEGMLLDEQELKQMLKTLREAMNKKFGKRESLLRELYDHLSGPNRSEAVSMAEMCDLISEWVGMDLSEGEVLTATDIMDLDQDGAVSLDDFMGFMGRQGEDIVSVDSVASRLSSAIVDIKEECRDAIIDVAITTGKAKDRTSEIHNPPSAGFCRVHGNLNERTMGTDIFLWYRPIK 253          
BLAST of mRNA_Ecto-sp13_S_contig5505.15760.1 vs. uniprot
Match: A0A482SNC3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNC3_9ARCH)

HSP 1 Score: 87.8 bits (216), Expect = 8.340e-15
Identity = 58/161 (36.02%), Postives = 87/161 (54.04%), Query Frame = 0
Query:  299 PQGEEVVEAT-SLAARLGSAIVDIEVSTSKDQEHELEQSGYKVV----DANVNAGTLGP------PIHVWYRRLKHGGAGMRLKPLVDVVVDHKNVNSALVVDGYQCIDRSLSKGTPLGASNYLWVRRAMTEEEEARDSIVDLAVTTGKAKDRTSDIHTPP 448
            PQ   + EA  +L   L  AIVDI VS ++ QE ++ ++GY  +      ++   T GP         +W  R   G    R KP+VD++++  +V+S LV+ GY C         P+ A  YLW++RA T+EEE +D+I+DL VTTGK K+ +  I   P
Sbjct:   74 PQSPAIKEALRALNGGLTDAIVDIHVSATEQQEADIARNGYIQLLQDSTGSIRRSTQGPISTFGNKASLWLWRRSQGTCSGRFKPIVDIILESASVSSDLVLAGYIC------DPVPI-AGQYLWIKRATTDEEE-KDAIIDLFVTTGKMKNASDSIWQSP 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5505.15760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FR08_ECTSI6.840e-19388.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEX3_9STRA2.940e-3339.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SNC3_9ARCH8.340e-1536.02Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 140..307
e-value: 4.2E-9
score: 38.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 281..293
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 268..303
score: 11.64
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 146..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5505contigEcto-sp13_S_contig5505:2642..9038 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5505.15760.1mRNA_Ecto-sp13_S_contig5505.15760.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5505 285..9038 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5505.15760.1 ID=prot_Ecto-sp13_S_contig5505.15760.1|Name=mRNA_Ecto-sp13_S_contig5505.15760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=458bp
MVKNAIATTGTAAQLEPTSTRRRGSKQQGDPSSRRGSGSHKRRTSATTTA
VISHGATTTTATANRRRRSSGGGGDGRAMSTASYAATASAAAVSGSTAPG
GDLGGRRGGAANSGDISHRTIRDAVRAHAPKEEGGFLGVDEYVVHLYDKY
AEGGGMLSRKTFAQVIAEIVGEDGLTPVELGDAFDWFQKASGVQGGISFD
AFLQGNLMSEDERRETAGKLRSKIKKKFGKRDDQLRELFDFMAEPNRGDH
ASARVLCEVVDEWLKVDIAEEEAISVLQMMDLDRDGAVSVDDFMGFMGPQ
GEEVVEATSLAARLGSAIVDIEVSTSKDQEHELEQSGYKVVDANVNAGTL
GPPIHVWYRRLKHGGAGMRLKPLVDVVVDHKNVNSALVVDGYQCIDRSLS
KGTPLGASNYLWVRRAMTEEEEARDSIVDLAVTTGKAKDRTSDIHTPPAR
QATVRCD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair