prot_Ecto-sp13_S_contig5504.15758.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5504.15758.1
Unique Nameprot_Ecto-sp13_S_contig5504.15758.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5504.15758.1 vs. uniprot
Match: D7FZK2_ECTSI (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZK2_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 3.410e-106
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MGDEERKTCFELAIQNVQCGAGMGLLFGAVQESFKNPPQPRPTDKVVLNPPKSDVMAKAMSSMGRQAFMMAAVAVVYSAGECGSEYVRGKDDAVNSAVGACMAAGAAGLKTGKISHACAGCLGGAVIMSAVRLGTDINGSKSLDRARLDAKRAGKREKLEGV 162
            MGDEERKTCFELAIQNVQCGAGMGLLFGAVQESFKNPPQPRPTDKVVLNPPKSDVMAKAMSSMGRQAFMMAAVAVVYSAGECGSEYVRGKDDAVNSAVGACMAAGAAGLKTGKISHACAGCLGGAVIMSAVRLGTDINGSKSLDRARLDAKRAGKREKLEGV
Sbjct:    1 MGDEERKTCFELAIQNVQCGAGMGLLFGAVQESFKNPPQPRPTDKVVLNPPKSDVMAKAMSSMGRQAFMMAAVAVVYSAGECGSEYVRGKDDAVNSAVGACMAAGAAGLKTGKISHACAGCLGGAVIMSAVRLGTDINGSKSLDRARLDAKRAGKREKLEGV 162
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5504.15758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZK2_ECTSI3.410e-106100.00Mitochondrial import inner membrane translocase su... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 15..127
e-value: 8.0E-16
score: 58.4
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 14..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5504contigEcto-sp13_S_contig5504:2840..5584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5504.15758.1mRNA_Ecto-sp13_S_contig5504.15758.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5504 2840..5584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5504.15758.1 ID=prot_Ecto-sp13_S_contig5504.15758.1|Name=mRNA_Ecto-sp13_S_contig5504.15758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MGDEERKTCFELAIQNVQCGAGMGLLFGAVQESFKNPPQPRPTDKVVLNP
PKSDVMAKAMSSMGRQAFMMAAVAVVYSAGECGSEYVRGKDDAVNSAVGA
CMAAGAAGLKTGKISHACAGCLGGAVIMSAVRLGTDINGSKSLDRARLDA
KRAGKREKLEGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22