prot_Ecto-sp13_S_contig5504.15757.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5504.15757.1
Unique Nameprot_Ecto-sp13_S_contig5504.15757.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5504.15757.1 vs. uniprot
Match: D7FZK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK1_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 9.550e-67
Identity = 119/128 (92.97%), Postives = 120/128 (93.75%), Query Frame = 0 
Query:   47 MSDFAVGAVTPKPTISKEEDRRLKLQQWKESKAALEKKVTPAERKAAPDRKAQFFERRERRLQEEREKRASRSGKENNMPPAEPSRKVAGSDQTHRLSSTLRPGPASDGQVELTETTPASAARQPRAK 174
            MSD AV  VTPKPTISKEEDRRLKLQQWKESKAALEKKVTPAERKAAPDRKAQFFERRERRLQEEREKRASRSGKENNMPPAE SRK AGSDQTHRLSST RPG ASDGQV+LTETTPASAARQPR K
Sbjct:    1 MSDVAVVGVTPKPTISKEEDRRLKLQQWKESKAALEKKVTPAERKAAPDRKAQFFERRERRLQEEREKRASRSGKENNMPPAEASRKAAGSDQTHRLSSTPRPGAASDGQVKLTETTPASAARQPRVK 128
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BLAST of mRNA_Ecto-sp13_S_contig5504.15757.1 vs. uniprot
Match: A0A6H5JIX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX2_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 4.230e-45
Identity = 110/153 (71.90%), Postives = 112/153 (73.20%), Query Frame = 0 
Query:   47 MSDFAVGAVTPKPTISKEEDRRLKLQQWKESKAALEKKVTPAERKAAPDRKAQFFERRERRLQEEREKRASRSGKENNMPPAEPSRKVAGSDQTHRLSSTLRPGPASDGQVELTETTPASAARQPRAKQATATPSSAPGRAPKAPTNAATAVA 199
            MSD AV  VTPKPTISKEEDRRLKLQQWKESKAALEKKVTPAERKAAPDRKAQFFERRER          SRSGKENNMPP E SRK AGSDQT RLSST RP PAS+ QV+LTE                     APGRAPKAPTNAATAVA
Sbjct:    1 MSDIAVIGVTPKPTISKEEDRRLKLQQWKESKAALEKKVTPAERKAAPDRKAQFFERRERXXXXXXXXXXSRSGKENNMPPVEASRKAAGSDQTQRLSSTPRPRPASNDQVKLTEXXXXXXXXXXXXXXXXXXXXXAPGRAPKAPTNAATAVA 153
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5504.15757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZK1_ECTSI9.550e-6792.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIX2_9PHAE4.230e-4571.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5504contigEcto-sp13_S_contig5504:4..2572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5504.15757.1mRNA_Ecto-sp13_S_contig5504.15757.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5504 2..2572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5504.15757.1 ID=prot_Ecto-sp13_S_contig5504.15757.1|Name=mRNA_Ecto-sp13_S_contig5504.15757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
LTSAARLVCTVARRDLLAFGREEGKRVLRLTESARASTVEYLHTGAMSDF
AVGAVTPKPTISKEEDRRLKLQQWKESKAALEKKVTPAERKAAPDRKAQF
FERRERRLQEEREKRASRSGKENNMPPAEPSRKVAGSDQTHRLSSTLRPG
PASDGQVELTETTPASAARQPRAKQATATPSSAPGRAPKAPTNAATAVAA
AAS
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