prot_Ecto-sp13_S_contig55002.15752.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI) HSP 1 Score: 190 bits (482), Expect = 9.710e-54 Identity = 100/138 (72.46%), Postives = 100/138 (72.46%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK 138
GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEK VLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK
Sbjct: 45 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEK--------------------------------------VLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK 144
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA) HSP 1 Score: 166 bits (419), Expect = 6.590e-45 Identity = 83/138 (60.14%), Postives = 96/138 (69.57%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK 138
GTGKTVCLI+LIT+YQ+ HPEVGKLIYCTRTVPEM+KC+EE+KRVI YR++QLGP G K VLALCLSSRRNLCIH+RV+E++DREAVDGACRDMTASWVR+
Sbjct: 45 GTGKTVCLIALITAYQYQHPEVGKLIYCTRTVPEMVKCVEEIKRVIRYREEQLGPAGSK--------------------------------------VLALCLSSRRNLCIHQRVLEDADREAVDGACRDMTASWVRQ 144
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A7S1UJA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJA8_9STRA) HSP 1 Score: 154 bits (390), Expect = 6.300e-44 Identity = 78/136 (57.35%), Postives = 90/136 (66.18%), Query Frame = 0
Query: 3 GKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK 138
GKTVCL+SLITSYQ+A PE+GKLIYCTRTVPEM+KC+EELKRV+ YR+ +GPEG G +LALCLSSRRN+CIH+RV+EESDREAVD CR MTASWVRK
Sbjct: 27 GKTVCLMSLITSYQYARPEMGKLIYCTRTVPEMVKCVEELKRVVAYREQCVGPEG--------------------------------------GKILALCLSSRRNMCIHDRVMEESDREAVDATCRGMTASWVRK 124
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC) HSP 1 Score: 159 bits (402), Expect = 1.440e-42 Identity = 83/138 (60.14%), Postives = 92/138 (66.67%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK 138
GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEM+KC+EE+++VI YR +G EG G VLA+CLSSRRNLCIHERV+EESDREAVD ACR MTASWVR+
Sbjct: 46 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEG--------------------------------------GKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQ 145
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A482RW16_9ARCH (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RW16_9ARCH) HSP 1 Score: 150 bits (379), Expect = 1.060e-41 Identity = 79/137 (57.66%), Postives = 87/137 (63.50%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVR 137
GTGKTVCLISLITSYQF +P+ GKLIYCTRTVPEM KC++E+K+VI YR+ LGPEG G VLALCLSSRRN+CIH RV EESDRE VD CRDMTASWVR
Sbjct: 66 GTGKTVCLISLITSYQFQYPQTGKLIYCTRTVPEMAKCMDEIKKVIEYRQKLLGPEG--------------------------------------GRVLALCLSSRRNMCIHPRVQEESDRETVDTKCRDMTASWVR 164
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A7S2SJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJK5_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.120e-41 Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVI-EESDREAVDGACRDMTASWVRK 138
GTGKTVC++SL+TSYQ AHPE+GKLIYCTRTVPEM KC++ELK+VIGYR LG + +AG + + LALCLSSRRN+CIHE+V+ ++SDREAVD CRD+TASWVR+
Sbjct: 1 GTGKTVCVLSLVTSYQLAHPEMGKLIYCTRTVPEMSKCMQELKQVIGYRDKMLGTTDAEIG-----------AAGGSTF-------------------LALCLSSRRNMCIHEKVMAQDSDREAVDSLCRDLTASWVRQ 109
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA) HSP 1 Score: 154 bits (390), Expect = 6.070e-41 Identity = 79/138 (57.25%), Postives = 90/138 (65.22%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK 138
GTGKTVCL+SLITS QFA PE+GK IYCTRTVPEM+KC+EELKRV+ YR + +G EG K +LALCLSSRRN+CIH+RV+EESDREAVD ACR MTASWVRK
Sbjct: 89 GTGKTVCLMSLITSVQFARPEMGKFIYCTRTVPEMVKCVEELKRVVNYRAECVGAEGRK--------------------------------------ILALCLSSRRNMCIHDRVLEESDREAVDAACRSMTASWVRK 188
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A7S1CFN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFN5_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.170e-39 Identity = 76/138 (55.07%), Postives = 84/138 (60.87%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLSAGKAVYTHSLRVRPSIIFPTLRGYVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRK 138
GTGKTV L+SLITSYQ AHP VGKL+YCTRTVPEM KC+ ELKRVI YR +LGPEG G VLA CLSSRRN+CIHERV+ E+DRE VD ACR TA WVR+
Sbjct: 55 GTGKTVALLSLITSYQLAHPTVGKLMYCTRTVPEMTKCVGELKRVIEYRVKELGPEG--------------------------------------GNVLACCLSSRRNMCIHERVMAEADREQVDAACRKRTAPWVRE 154
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A7S2IEH0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IEH0_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.840e-36 Identity = 79/163 (48.47%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPE------GEKASTVVFLWSCKPL----SAGKAVYTHSLRVRPSII-------------FPTLRGY----VLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWV 136
GTGKTVCL+SLITSYQFA+P GKL+YCTRTVPEM +EEL V+ YR +QL + G+ T + K + SA + +R P G VLALCLSSRRN+C+HERV+EESDREAVD ACR MTA+WV
Sbjct: 71 GTGKTVCLLSLITSYQFANPSAGKLVYCTRTVPEMNSVMEELATVLSYRAEQLQDDQNQQEVGDNGGTAMDGSGAKDIEDVVSADTPESNNGVRKXXXXXXXXXXXXXXXMGSIPDNGGAGGSGVLALCLSSRRNMCVHERVMEESDREAVDAACRSMTATWV 233
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Match: A0A1Z5J667_FISSO (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J667_FISSO) HSP 1 Score: 136 bits (342), Expect = 1.750e-34 Identity = 83/153 (54.25%), Postives = 92/153 (60.13%), Query Frame = 0
Query: 1 GTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKASTVVFLWSCKPLS--AGKAVYTHSLRVR--------------PSIIFPTLRGY-VLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWV 136
GTGKTVCL+SLITSYQ+A+P GKLIYCTRTVPEM +EEL V+ YR L PE + S V S + G S R R PS G VLALCLSSRRN+CIHERV+ ESDREAVD ACR MTASWV
Sbjct: 45 GTGKTVCLLSLITSYQYANPSAGKLIYCTRTVPEMNHVMEELATVLDYRARMLHPE--QPSEVEISCSSGDMEDIGGTTADRSSKRARKVYRREDSGKAPMGPSSSRAGAGGSGVLALCLSSRRNMCIHERVMAESDREAVDSACRSMTASWV 195 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55002.15752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig55002.15752.1 ID=prot_Ecto-sp13_S_contig55002.15752.1|Name=mRNA_Ecto-sp13_S_contig55002.15752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bpback to top |