prot_Ecto-sp13_S_contig5500.15751.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5500.15751.1
Unique Nameprot_Ecto-sp13_S_contig5500.15751.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1055
Homology
BLAST of mRNA_Ecto-sp13_S_contig5500.15751.1 vs. uniprot
Match: A0A6H5JLB4_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB4_9PHAE)

HSP 1 Score: 1085 bits (2806), Expect = 0.000e+0
Identity = 784/972 (80.66%), Postives = 795/972 (81.79%), Query Frame = 0
Query:    1 MRIQALTLVNQSDGGGEGRWETREFDVKLTLPKTTSAALLWSDLSKDNLISDKKEVFSRTGIWRGPLSGLPQSTLLELPSAAPPSETTLELVLLPEADGGDSLVLSLARAQLSVPLMRGYRYTLVRPADGAGSYAFGAAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSYAAATLSSLMAELDGSLADSLVSKSAAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------REPETWGFDTDAVALLVATPYDGSGDGESGDGGGRLRTHLERQRLARAALRAGDVDRLLLCLGRLEGEAPPVHGGRADRFDDPAAVAERAQRRAAGSKGEDGSTGAGAAKTTTPMWSPPFPPEEFDGLDDEIGMDSEDLGLGASLGGYPPYHVGASGGRKAAGAGDEKRQVNGGGKMSAYHVEALCCLLVALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXEGREAKQREASRDCCETAAAAAVVGRRPGEGAAGCDAAPAAGDSGREGADRLGGGXXXXXXXXXXXXXXXXXIAAQATAALDGSCLRSVCRQYLFGADWRFVSAHQQFYLALLRLLQEVLRPFNDAGAGGDXXXXGGCRWQAAGGAGEPRSRQPLARSLLHPSADCPGMVDLLDSLCVALDDLVACPPQPPPPAASPAPTRLPXXXXXXAAAKHLPPPSPASPLKLSFLTQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SQLSHLYTYAMAAAQKQKTGLPSXXXXXXXXXLSQSWYQMPPGWIQHGKSQETAATQSVLDAHAFSAAAXXXXXGAPSLGPASYLVQAKYHPKYKKYFKMLSVGLPRSAALLRMSKDGVDQSILDAPDAMLPLSGAGPAXXXXXXXXXXSASALSAATAVSQAGSPCSSASVTKE 963
            MRIQALTLVNQSD GGEGRWETRE D KLTLPK TSAALLWSDLSKDNLISDKKEVFSRTGIWRGPLSGLPQSTLLELPSAAPPSETTLELVLLPEADGGDSL+LS ARAQLSVPLMRGYR TLVRP DGAG YA GAAAT              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          PG  AAATLSSLMA+LDGSLADSLVS +AA DG                                       R+PETWGFDTDAVALLVATP     DG S     RLRTH ERQRLARAALRAGDVDRLLLCLGRLEGE PPVHGGRADR+DDPAAVAERAQRRAAGSKGEDGSTGAGA KTTTPMWSPPFPPEEFDGLDDEIGM SEDL LGASLGGYPPYHVGASGGRKAAGAG+EKRQVNGG KMSAYHVEALC LLVALGAXXXXXXXXXXXXXXXXXXXXXXXXXXX   + KQREA RDC  TAAAAAV GRRPGEGAAGC+AAPAAG+SGREG DRLGGGXXXXXXXXXXXXXXXX IAAQATAALDGSCLRSVCRQYLFGADWRFVS HQQFYLALLRLL+EVLRPFNDA  GGD    G CR QAAGGAGEPRS QPLARSLLHPSADCPGMVDLLDSLCVALDDLVACPPQPP PAA  APTRLP      AAAKHLPPPSP SPLKL FLTQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SQLSHLYTYAMAAAQKQ      XXXXX    LSQSWYQMPPGWIQHGKSQET A QSVLDAHAFSAAA     GAPSLGPA YLVQAKYHPKYKKYFKMLSVGLPRSAALLRMSKDGVDQ+ILDAPDAMLP SGAGPA          SASALSAA AVS AG PCSS SVTKE
Sbjct:    1 MRIQALTLVNQSDEGGEGRWETREVDAKLTLPKITSAALLWSDLSKDNLISDKKEVFSRTGIWRGPLSGLPQSTLLELPSAAPPSETTLELVLLPEADGGDSLLLSFARAQLSVPLMRGYRCTLVRPPDGAGGYAVGAAAT--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDCKKNGGGTLVPSAPKTSAKGAAAAPGGCAAATLSSLMAQLDGSLADSLVSTAAATDGADAASQSTAVKYPGTTAAAAAAGEASPAAVSKETTERTERDPETWGFDTDAVALLVATP-----DGGSXXXXXRLRTHRERQRLARAALRAGDVDRLLLCLGRLEGEVPPVHGGRADRYDDPAAVAERAQRRAAGSKGEDGSTGAGAGKTTTPMWSPPFPPEEFDGLDDEIGMYSEDLSLGASLGGYPPYHVGASGGRKAAGAGEEKRQVNGGSKMSAYHVEALCRLLVALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVKQREAPRDCSGTAAAAAV-GRRPGEGAAGCEAAPAAGNSGREGVDRLGGGXXXXXXXXXXXXXXXX-IAAQATAALDGSCLRSVCRQYLFGADWRFVSTHQQFYLALLRLLREVLRPFNDARPGGDGG--GDCRGQAAGGAGEPRSPQPLARSLLHPSADCPGMVDLLDSLCVALDDLVACPPQPPQPAAL-APTRLPQPSASPAAAKHLPPPSPTSPLKLLFLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLSHLYTYAMAAAQKQXXXXXXXXXXX----LSQSWYQMPPGWIQHGKSQETEAMQSVLDAHAFSAAAAAVAAGAPSLGPAGYLVQAKYHPKYKKYFKMLSVGLPRSAALLRMSKDGVDQAILDAPDAMLPFSGAGPAAMMGVPGASPSASALSAAAAVSPAGPPCSSGSVTKE 944          
BLAST of mRNA_Ecto-sp13_S_contig5500.15751.1 vs. uniprot
Match: D8LTA3_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA3_ECTSI)

HSP 1 Score: 890 bits (2301), Expect = 7.650e-302
Identity = 699/1045 (66.89%), Postives = 709/1045 (67.85%), Query Frame = 0
Query:    1 MRIQALTLVNQSDGGGEGRWETREFDVKLTLPKTTSAALLWSDLSKDNLISDKKEVFSRTGIWRGPLSGLPQSTLLELPSAAPPSETTLELVLLPEADGGDSLVLSLARAQLSVPLMRGYRYTLVRPADGAGSYAFGAAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSYAAATLSSLMAELDGSLADSLVSKSAAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPETWGFDTDAVALLVATPYDGSGDGESGDGGGRLRTHLERQRLARAALRAGDVDRLLLCLGRLEGEAPPVHGGRADRFDDPAAVAERAQRRAAGSKGEDGSTGAGAAKTTTPMWSPPFPPEEFDGLDDEIGMDSEDLGLGASLGGYPPYHVGASGGRKAAGAGDEKRQVNGGGKMSAYHVEALCCLLVALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXEGREAKQREASRDCCETAAAAAVVGRRPGEGAAGCDAAPAAGDSGREGADRLGGGXXXXXXXXXXXXXXXXXIAAQATAALDGSCLRSVCRQYLFGADWRFVSAHQQFYLALLRLLQEVLRPFNDAGAGGDXXXXGGCRWQAAGGAGEPRSRQPLARSLLHPSADCPGMVDLLDSLCVALDDLVACPPQPPPPAASPAPTRLPXXXXXXAAAKHLPPPSPASPLKLSFLTQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLSHLYTYAMAAAQKQKTGLPSXXXXXXXXXLSQSWYQMPPGWIQHGKSQETAATQSVLDAHAFSAAAXXXXXGAPSLGPASYLVQAKYHPKYKKYFKMLSVGLPRSAALLRMSKDGVDQSILDAPDAMLPLSGAGPAXXXXXXXXXXSASALSAATAVSQAGSPCSSASVTKEAXXXXXXXXXXXXXTSPVLEDHQQGVPPPSHGTPGVPLGGQDGAPVASSPAAEALPXXXXXLPSAIPPXXXXXXXXXSLPLT 1045
            MRIQALTLV+QSD GGEGRWETRE D KLTLPK TSAALLWSDLSKDNLISDKKEVFSRTGIWRGPLSGLPQSTLLELPSAAPPSETTLELVLLPEADGGDSLVLS ARAQLSVPLMRGYRYTLVRPA GAG YA GAAAT XXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                      G+L  S    S     XXXXXXX                                        L +   DG           RLRT  ERQRLA AALRAGDVDRLLLCLGRLEGEAPPVHGGRADR+DDPAAVAERAQRR AGSKGEDGSTGAGAAKTTTP WSPPFPPEEFDGLDDEIGMDSED G GASLGGYPPYHVGASGGRK AGAG+EKRQVNGG KMSAYHVEALC LL AL A                   XXXX    EGRE KQ EA RDC   AA    VGRRPGEGAAGCDAAPAA +SG EGADRLGGG  XXXX           IAAQATA LDGSCLRSVCRQYLFGADWRFVS HQQFYLALLRLLQEVLRPFN  GAGGD    GGCR QAAGGAGEPRSRQPLA+SLL PS DCPGMVDLLDSLCVALDDLVACPPQPPPPAA PAPTRLP            P  SPA+                                                                                      HGKSQETA  QSVLDAHAFSAAA     GAPSLGPA+YLVQAKYHPKY KYFKMLSVGLPRSAALLRMSKDGVDQ+ILDAPDAMLPLSGAGPAXXXXXXXXXXSASALSAA AVS AG PCS        XXXXXXXXXXXXX                HGTPGVP  GQDGAPVASSPAAE   XXXXXLPSAI  XXX   XXXSLPLT
Sbjct:    1 MRIQALTLVDQSDAGGEGRWETREVDAKLTLPKITSAALLWSDLSKDNLISDKKEVFSRTGIWRGPLSGLPQSTLLELPSAAPPSETTLELVLLPEADGGDSLVLSFARAQLSVPLMRGYRYTLVRPAGGAGGYAIGAAATXXXXXXXXXXXXXXXXKEAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKKNDG--------------------------------GTLVPSAPKTSXXXXXXXXXXXX-------------------------------------XXXLSSLMADGXXXXXX-----RLRTQRERQRLAGAALRAGDVDRLLLCLGRLEGEAPPVHGGRADRYDDPAAVAERAQRREAGSKGEDGSTGAGAAKTTTPTWSPPFPPEEFDGLDDEIGMDSEDWGPGASLGGYPPYHVGASGGRKVAGAGEEKRQVNGGSKMSAYHVEALCRLLEAL-ASGGDDDGDCGGIGSGEEEPXXXXRGAGEGREVKQLEAPRDCSGRAA----VGRRPGEGAAGCDAAPAADNSGPEGADRLGGGGVXXXXDGVDADYDDD-IAAQATATLDGSCLRSVCRQYLFGADWRFVSTHQQFYLALLRLLQEVLRPFNGPGAGGDG---GGCRRQAAGGAGEPRSRQPLAQSLLRPSVDCPGMVDLLDSLCVALDDLVACPPQPPPPAALPAPTRLPQ-----------PSASPAA--------------------------------------------------------------------------------------HGKSQETAVQQSVLDAHAFSAAAAAVAAGAPSLGPANYLVQAKYHPKYNKYFKMLSVGLPRSAALLRMSKDGVDQAILDAPDAMLPLSGAGPAXXXXXXXXXXSASALSAAAAVSPAGPPCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGTPGVPSDGQDGAPVASSPAAEXXXXXXXXLPSAIXXXXXAAAXXXSLPLT 865          
BLAST of mRNA_Ecto-sp13_S_contig5500.15751.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.500e-9
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0
Query:  839 QETAATQSVLDAHAFSAAAXXXXXGA-PSLGPASYLVQAKYHPKYKKYFKMLSVGLPRSAALLRMSKDGVDQSILDAPDAMLPLSGAG 925
            ++ AA  ++L A A +        GA P  GP   +  AK HP Y+ YFKML +G+PR AAL +M+KDGVDQSILD P+A+  L  +G
Sbjct: 2221 RDAAAAAAMLSAEAENQRDGERGEGASPPAGPPKGMAPAKDHPDYQSYFKMLKMGIPRGAALQKMAKDGVDQSILDTPEALFSLPESG 2308          
BLAST of mRNA_Ecto-sp13_S_contig5500.15751.1 vs. uniprot
Match: D8LT97_ECTSI (Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT97_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 4.210e-9
Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 0
Query:  865 PSLGPASYLVQAKYHPKYKKYFKMLSVGLPRSAALLRMSKDGVDQSILDAPDAMLPLSGAG 925
            P  GP   +  AK HP Y+ YFKML +G+PR AAL +M+KDGVDQSILD P+A+  L  +G
Sbjct: 1435 PPAGPPKGMAPAKDHPDYRSYFKMLKMGIPRGAALQKMAKDGVDQSILDTPEALFSLPESG 1495          
BLAST of mRNA_Ecto-sp13_S_contig5500.15751.1 vs. uniprot
Match: UPI00158E48BC (WASH complex subunit 3 n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158E48BC)

HSP 1 Score: 55.8 bits (133), Expect = 5.360e-5
Identity = 23/51 (45.10%), Postives = 38/51 (74.51%), Query Frame = 0
Query:  870 ASYLVQAKYHPKYKKYFKMLSVGLPRSAALLRMSKDGVDQSILDAPDAMLP 920
            AS +     HP Y+KYFKM++VG+P+ A  ++M+++G+D S+LD PD ++P
Sbjct:  133 ASNVEPISSHPLYRKYFKMVNVGVPKPAVKIKMAQEGLDPSLLDDPDQLVP 183          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5500.15751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JLB4_9PHAE0.000e+080.66UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D8LTA3_ECTSI7.650e-30266.89UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JR06_9PHAE1.500e-946.59FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LT97_ECTSI4.210e-955.74Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
UPI00158E48BC5.360e-545.10WASH complex subunit 3 n=1 Tax=Chelonus insularis ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019309WASH complex subunit 3PFAMPF10152CCDC53coord: 803..913
e-value: 1.6E-6
score: 28.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5500contigEcto-sp13_S_contig5500:2811..8960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5500.15751.1mRNA_Ecto-sp13_S_contig5500.15751.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5500 2799..8960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5500.15751.1 ID=prot_Ecto-sp13_S_contig5500.15751.1|Name=mRNA_Ecto-sp13_S_contig5500.15751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1055bp
MRIQALTLVNQSDGGGEGRWETREFDVKLTLPKTTSAALLWSDLSKDNLI
SDKKEVFSRTGIWRGPLSGLPQSTLLELPSAAPPSETTLELVLLPEADGG
DSLVLSLARAQLSVPLMRGYRYTLVRPADGAGSYAFGAAATGAAAAAASG
GGGGGGDGKEAGSASAAPGAAAAAAAAGETNSDVSAATAAATEAAAAAAA
GVDGGSGGGGGTSGNKCKKNGGGTLVSSAPKTSAKAAAAAPGSYAAATLS
SLMAELDGSLADSLVSKSAAADGADAASQSTAAAAAAAGEASPAAVSKET
TERTEREPETWGFDTDAVALLVATPYDGSGDGESGDGGGRLRTHLERQRL
ARAALRAGDVDRLLLCLGRLEGEAPPVHGGRADRFDDPAAVAERAQRRAA
GSKGEDGSTGAGAAKTTTPMWSPPFPPEEFDGLDDEIGMDSEDLGLGASL
GGYPPYHVGASGGRKAAGAGDEKRQVNGGGKMSAYHVEALCCLLVALGAG
ADDDGDGGGIGSGEKEPGGGGDKGAGEGREAKQREASRDCCETAAAAAVV
GRRPGEGAAGCDAAPAAGDSGREGADRLGGGGDGCDCDGVDADDDDDDIA
AQATAALDGSCLRSVCRQYLFGADWRFVSAHQQFYLALLRLLQEVLRPFN
DAGAGGDGGDGGGCRWQAAGGAGEPRSRQPLARSLLHPSADCPGMVDLLD
SLCVALDDLVACPPQPPPPAASPAPTRLPQPSASPAAAKHLPPPSPASPL
KLSFLTQQEQEQHQQFLLLQQQQHASSPPPPPPPPQSSSQLSHLYTYAMA
AAQKQKTGLPSTPPPPPPPPLSQSWYQMPPGWIQHGKSQETAATQSVLDA
HAFSAAAAAAAAGAPSLGPASYLVQAKYHPKYKKYFKMLSVGLPRSAALL
RMSKDGVDQSILDAPDAMLPLSGAGPAAMMGVPGAGPSASALSAATAVSQ
AGSPCSSASVTKEAAANTPPPPPPPQETSPVLEDHQQGVPPPSHGTPGVP
LGGQDGAPVASSPAAEALPPPPPPLPSAIPPPKTAAAPPPSLPLTAPHPP
PGPIY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019309WASHC3