prot_Ecto-sp13_S_contig550.15750.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig550.15750.1
Unique Nameprot_Ecto-sp13_S_contig550.15750.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length168
Homology
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BLAST of mRNA_Ecto-sp13_S_contig550.15750.1 vs. uniprot
Match: A0A6H5JRT0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT0_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.630e-67
Identity = 110/117 (94.02%), Postives = 116/117 (99.15%), Query Frame = 0 
Query:    1 AQTISDWYYNFGPDTSQGTFQASLNWLSSVFDENYRIVEIDDRPYLTAGCLVSPTFDAVDQASATTSATLTANVNADALDAAEAHNFGTRRAPTCDGGESPLYRRVCSCFFTAPSST 117
            AQTISDWY+NFGPDTSQG+FQASL+WLSSVFDENYRIV++DDRPYLTAGCLVSPTFDAVDQASATTSA+LTANVNADALDAAEAHNFGTRR PTCDGGESPLYRRVCSCFFTAPSST
Sbjct:  101 AQTISDWYFNFGPDTSQGSFQASLHWLSSVFDENYRIVDVDDRPYLTAGCLVSPTFDAVDQASATTSASLTANVNADALDAAEAHNFGTRRTPTCDGGESPLYRRVCSCFFTAPSST 217
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig550.15750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRT0_9PHAE1.630e-6794.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 120..141
score: 51.82
coord: 142..158
score: 57.65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig550contigEcto-sp13_S_contig550:9956..10459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig550.15750.1mRNA_Ecto-sp13_S_contig550.15750.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig550 9956..10461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig550.15750.1 ID=prot_Ecto-sp13_S_contig550.15750.1|Name=mRNA_Ecto-sp13_S_contig550.15750.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
AQTISDWYYNFGPDTSQGTFQASLNWLSSVFDENYRIVEIDDRPYLTAGC
LVSPTFDAVDQASATTSATLTANVNADALDAAEAHNFGTRRAPTCDGGES
PLYRRVCSCFFTAPSSTPTPTTSPTTPAPTPGPTSPSPTPSPTPTPTSPQ
TTPYPSPSSPIIAAGYWR
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