prot_Ecto-sp13_S_contig55.15745.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig55.15745.1
Unique Nameprot_Ecto-sp13_S_contig55.15745.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length263
Homology
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A6H5KBH7_9PHAE (PsbP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH7_9PHAE)

HSP 1 Score: 444 bits (1142), Expect = 2.120e-156
Identity = 238/260 (91.54%), Postives = 244/260 (93.85%), Query Frame = 0
Query:    1 MTPSFVTAFPSLALLAPSIAFNPSPIPSNSRGASFNIKMCTESRAHFVRTWSAAAIAVVSTQGPSPSAATTPTTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKADGFTTAANYQTGDSLNLSMGAPSNAKTIGDVSALAIAVEATPSEGGAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRNKMDLILNAIQASFRVGDVGVVESSSTDFN 260
            MTPSFV AF SL  LAPSIAFNP PIP NSRGASFNI+MCT SRAHFVRT SAA IAVVSTQGPSPSAATTPTTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQ TVCAYAYPVGWVEK+KADGF TAANYQTGDSL+L+MGAPS AKTIGDVSALAIA EATPSEG AKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVER+SYIAATVKQRKL TLVATVSGERRNKMDLIL AIQASFRVGDVGVVE+SSTDFN
Sbjct:    1 MTPSFVAAFSSLGFLAPSIAFNPLPIPLNSRGASFNIQMCTGSRAHFVRTCSAATIAVVSTQGPSPSAATTPTTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQETVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGAPSKAKTIGDVSALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERVSYIAATVKQRKLLTLVATVSGERRNKMDLILKAIQASFRVGDVGVVETSSTDFN 260          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: D7FKW7_ECTSI (PsbP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW7_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 8.480e-106
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0
Query:   87 MIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKADGFTTAANYQTGDSLNLSMGAPSNAKTIGDVSALAIAVEATPSEGGAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRNKMDLILNAIQASFRVGDVGVVESSSTDFNT 261
            MIAEDG FTSSYVKVEDNGQGTVCAYAYPVGWVEK+KADGF TAANYQTGDSL+L+MG PS AKTIGDV ALAIA EATPSEG AKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVS ERRNKMDLILNAIQASFRVGDVGVVE+SSTD NT
Sbjct:    1 MIAEDGDFTSSYVKVEDNGQGTVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGTPSKAKTIGDVGALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLILNAIQASFRVGDVGVVETSSTDLNT 175          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A7S2UUM0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUM0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.070e-15
Identity = 61/187 (32.62%), Postives = 96/187 (51.34%), Query Frame = 0
Query:   69 ATTPTTVVNSVLSAYGIPMIAEDGGFTSSYVKVED--NGQGTVCAYAYPVGWVEKEKADGFTTAANYQTGDSLNLSMGAPS--NAKTIGDVSALAIAVEATPSEG-----GAKVLQ-EKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRNKMDLILNAIQASFR 245
            AT   +VVNSVL AYG+P +  + GF + + +      G   + ++AYP  WVE  K      A+NYQTGD + L   A    + +++ D+    +A   TP +        KV++ E+  +     Y  +T+K+NT+T SGYDVE+    + T+ +  LF L A+    R+ KM+  +     SFR
Sbjct:    8 ATDSMSVVNSVLGAYGVPYMDSEIGFAALFEETTAPYGGAKAIISFAYPKTWVETTKGRTLG-ASNYQTGDRVVLVTKAKGQYDGRSVMDIPVQELAEVITPGDATQAASAYKVMKDEQLASMKSQEYRLVTLKFNTITSSGYDVEQYLVASCTLSKGNLFCLAASCPTARKKKMEESITKTALSFR 193          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A2V0NNW9_9CHLO (Photosystem II oxygen evolving complex n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NNW9_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 9.530e-12
Identity = 60/190 (31.58%), Postives = 97/190 (51.05%), Query Frame = 0
Query:   73 TTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKA-DGFTTAANYQTGDSLNLSMGAPSNAKTIGDVSALAIAVEATPSEGGAKVLQEK-------------AVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRN--KMDLILNAIQASFRV 246
            TT+VNSVL AYG+P +    G+     KV D+      ++ YP GWV +  +       +++QT D + +    P      GD++A A+A    P  GG ++ Q+              A T  G  Y YL     T+TRSGY + R ++ AA +++ KLF + A+V G++ N  K +L+ + ++ SFR+
Sbjct:   85 TTIVNSVLGAYGLPTLKASAGY-----KVWDDFSDE-WSFEYPRGWVARRNSLRRGVVISDFQTADKVAVEELDP---PPDGDLAAAAVAAAVLP--GGGRLTQDDVLGLPAKGAVRVAAETVDGQEYLYLEFPSETITRSGYQIRRRNFAAAALRRGKLFVIAASVRGDQYNEAKRELLEHTVR-SFRL 262          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A383W3H0_TETOB (PsbP domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W3H0_TETOB)

HSP 1 Score: 71.6 bits (174), Expect = 7.860e-11
Identity = 59/190 (31.05%), Postives = 95/190 (50.00%), Query Frame = 0
Query:   73 TTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKA-DGFTTAANYQTGDSLNLS-MGAPSNAKTIGDVSALAIAVEATPSEGGAKVLQEKAV-------------TKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRNK-MDLILNAIQASFRV 246
            TT+VNSVLSAYG+P +    GF   Y + ED        + YP  WV +  +       +++QT D +++  +  P +    GD++A A+A    P  GG +++Q+  +             T  G    YL     T+TRSGY++ R ++ AA VK  KL+T+ A+   ++ N+    +L  I  SFR+
Sbjct:  140 TTIVNSVLSAYGLPTLKASAGFRV-YDEFEDEFY-----FEYPKAWVSRRNSMRKGVVISDFQTADKVSVEELELPED----GDIAAAAVAAAVLP--GGRRLVQDDVLSLPAARLVKTHTETIDGQEMLYLEFPSETLTRSGYNIRRKNFAAAAVKLDKLYTIAASARSDQFNEEKKTLLQHIVESFRL 317          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A8J9WM49_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WM49_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 3.180e-9
Identity = 56/185 (30.27%), Postives = 91/185 (49.19%), Query Frame = 0
Query:   72 PTTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKA--DGFTTAANYQTGDSLNLSM-GAPSNAKTIGDVSALAIAVEATPSEGGAKVLQEKAVTK------GGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRNKM-DLILNAIQASFRV 246
            PTTV+NSVL AYG+P +   GGF       +D  Q  +  + YP  WV +  +   G    +++ T D   + +   PS+A  + +V   A++           +L ++   K       G+ YTY+     TVTRSGY + R ++  A  K   +++LVA+   ++ NK  + +L  + ASFRV
Sbjct:   44 PTTVLNSVLGAYGLPQLPGSGGFK----LYDDFDQEYI--FEYPRSWVGRSNSLRQG-VYVSDFNTADKAVVEVFPEPSSADLVLEVVRRAVSPGQEIGGDARLILPDERRIKTETRDIDGMRYTYIRFPSETVTRSGYQIRRKNFAVAAAKGGTVYSLVASARSDQYNKAKEEVLQRVVASFRV 221          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A0D2J6I9_9CHLO (PsbP domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2J6I9_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 6.030e-9
Identity = 56/190 (29.47%), Postives = 91/190 (47.89%), Query Frame = 0
Query:   73 TTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKADGFTTAANYQTGDSLNLS-MGAPSNAKTIGDVSALAIAVEATPSEGGAKVLQEK-------------AVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRN--KMDLILNAIQASFRV 246
            TT++NSVLS YG+P +    G+     KV D                  E AD +T    ++T D + +  +G P +    GD++  A+     P  GG ++ Q+              ++T  G  YTYL     T+TRSGY + R ++  A VK+ KL+T+ A+  G++ +  K  L+ + ++ SFRV
Sbjct:    9 TTIINSVLSGYGLPTLKASAGY-----KVWD------------------EFADEYT----FETADKIAVEVLGIPED----GDLATAAVTAAVLP--GGGRLTQDDLLTLPPKSDVKVTSLTLDGQEYTYLEFPSETITRSGYQIRRQNFAVAAVKRGKLYTIAASARGDQYSEAKRQLLQHVVE-SFRV 164          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A7S3A2S0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2S0_9RHOD)

HSP 1 Score: 60.5 bits (145), Expect = 3.690e-7
Identity = 54/191 (28.27%), Postives = 88/191 (46.07%), Query Frame = 0
Query:   75 VVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKADGFT-------------TAANYQTGDSLNLSMGAPSNAKTIGDV---SALAIAVEATPSEGGAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRNKMDLILNAIQASFRVGDV 249
            VVN VLSAYG+P I + GGFT     +E+ G   +  + YP  W+  ++  G                  +Y+  +SL      P++ K   DV       IA++    +   ++L++K +   G  Y   + K++T T SGY  ER + +A+TV    +F L    S  R  K++ +L     +F+V  V
Sbjct:   68 VVNGVLSAYGLPQIPDKGGFTPI---LEEYGSDKIVEFLYPSAWLVTKEQSGIDRPRLNQDRVVPTINIGDYRKAESLAF-YSTPASGKGTFDVPIDKLAKIAIQLPNPDY--RMLKDKKIATNG--YRLTSFKFDTYTTSGYMGERRALVASTVIDDTVFLLGGVCSELRYKKVEELLLTAMENFKVTKV 250          
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Match: A0A5J4YSH8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSH8_PORPP)

HSP 1 Score: 60.1 bits (144), Expect = 5.530e-7
Identity = 52/188 (27.66%), Postives = 86/188 (45.74%), Query Frame = 0
Query:   74 TVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKEKADGFTTA----------ANYQTGDSLNLSMGAPS------NAKTIGDVSALAIAVEATPSEGGAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSGERRNKMDLILNAIQASFR 245
            TVVN+ LS YGIP + +  G+T+   + +D   G    + YP  WV        + A          +NY+T D   L +G P       +A ++ +++AL +  +AT       ++++ A +    +      K+N+ TRSGYDVER +  +ATV +  +  L  +    R       L  I  SF+
Sbjct:   84 TVVNAALSGYGIP-VQDVAGYTTFVHQWDD---GLFVKFQYPKSWVVSRVGSSLSAAPGKAVSPVSMSNYRTADQCALYVGPPQPKYRDISAVSVEELTALVLPGDATRDYSEYTLIRQ-AASAANASCKQYEFKFNSTTRSGYDVERYNVTSATVLKTCVVALSCSCVSNRIKSQAPALKLIADSFQ 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55.15745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KBH7_9PHAE2.120e-15691.54PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FKW7_ECTSI8.480e-10692.57PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2UUM0_9STRA2.070e-1532.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2V0NNW9_9CHLO9.530e-1231.58Photosystem II oxygen evolving complex n=1 Tax=Rap... [more]
A0A383W3H0_TETOB7.860e-1131.05PsbP domain-containing protein n=1 Tax=Tetradesmus... [more]
A0A8J9WM49_9CHLO3.180e-930.27Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A0D2J6I9_9CHLO6.030e-929.47PsbP domain-containing protein n=1 Tax=Monoraphidi... [more]
A0A7S3A2S0_9RHOD3.690e-728.27Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YSH8_PORPP5.530e-727.66Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 94..246
e-value: 1.6E-7
score: 33.3
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 111..246
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 111..246
e-value: 6.2E-7
score: 29.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.555

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig55contigEcto-sp13_S_contig55:4026..8788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig55.15745.1mRNA_Ecto-sp13_S_contig55.15745.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig55 3955..9784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig55.15745.1 ID=prot_Ecto-sp13_S_contig55.15745.1|Name=mRNA_Ecto-sp13_S_contig55.15745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp
MTPSFVTAFPSLALLAPSIAFNPSPIPSNSRGASFNIKMCTESRAHFVRT
WSAAAIAVVSTQGPSPSAATTPTTVVNSVLSAYGIPMIAEDGGFTSSYVK
VEDNGQGTVCAYAYPVGWVEKEKADGFTTAANYQTGDSLNLSMGAPSNAK
TIGDVSALAIAVEATPSEGGAKVLQEKAVTKGGVNYTYLTVKYNTVTRSG
YDVERISYIAATVKQRKLFTLVATVSGERRNKMDLILNAIQASFRVGDVG
VVESSSTDFNTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand
IPR002683PsbP_C