prot_Ecto-sp13_S_contig54950.15740.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig54950.15740.1
Unique Nameprot_Ecto-sp13_S_contig54950.15740.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
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BLAST of mRNA_Ecto-sp13_S_contig54950.15740.1 vs. uniprot
Match: D7G8G9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8G9_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 3.400e-13
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0 
Query:    1 LLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL 34
            LLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL
Sbjct:  239 LLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL 272
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BLAST of mRNA_Ecto-sp13_S_contig54950.15740.1 vs. uniprot
Match: A0A849X0C5_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=A0A849X0C5_9PROT)

HSP 1 Score: 47.0 bits (110), Expect = 5.000e-5
Identity = 20/33 (60.61%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:    1 LLWFALLGGVSGAVGELLPLGVDDNLSMPIVSG 33
            +L FA++GG +G+V ELLPL +DDN S+P+VSG
Sbjct:  171 ILVFAIIGGFAGSVAELLPLHIDDNFSIPVVSG 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig54950.15740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8G9_ECTSI3.400e-13100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A849X0C5_9PROT5.000e-560.61Uncharacterized protein n=1 Tax=Bdellovibrionales ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.632

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig54950contigEcto-sp13_S_contig54950:681..782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig54950.15740.1mRNA_Ecto-sp13_S_contig54950.15740.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig54950 681..782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig54950.15740.1 ID=prot_Ecto-sp13_S_contig54950.15740.1|Name=mRNA_Ecto-sp13_S_contig54950.15740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
LLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL
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