prot_Ecto-sp13_S_contig54919.15737.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig54919.15737.1
Unique Nameprot_Ecto-sp13_S_contig54919.15737.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length65
Homology
BLAST of mRNA_Ecto-sp13_S_contig54919.15737.1 vs. uniprot
Match: A0A1Z5KLR0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLR0_FISSO)

HSP 1 Score: 56.6 bits (135), Expect = 9.430e-8
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    7 NLESFYREGLGFEYPEIELDLTSVARTADADGIAAMVQLLVGAAVSCQGKADYIQAIMQ 65
            NL+ F++E L        +D T +AR ADAD +A++V+L+  AAV+C  K DYIQ IMQ
Sbjct:   74 NLQQFFQEDLKKTADFAAIDQTKIAREADADAVASLVELVAAAAVTCSSKGDYIQRIMQ 132          
BLAST of mRNA_Ecto-sp13_S_contig54919.15737.1 vs. uniprot
Match: A0A2P6NUS8_9EUKA (Calponin-homology (CH) domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUS8_9EUKA)

HSP 1 Score: 49.3 bits (116), Expect = 3.650e-5
Identity = 22/65 (33.85%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    1 LDQVSFNLESFYREGLGFEYPEIELDLTSVARTADADGIAAMVQLLVGAAVSCQGKADYIQAIMQ 65
            L +++  L+ F++  LGF   E+E+D  ++ R  +   +  ++QL++G A+ C+ K +YIQ+IMQ
Sbjct:  137 LKKINTALDEFFQNELGFS-SEVEVDTAAIIRDGNEAELVKLLQLILGTAIECENKVEYIQSIMQ 200          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig54919.15737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1Z5KLR0_FISSO9.430e-847.46Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A2P6NUS8_9EUKA3.650e-533.85Calponin-homology (CH) domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008636Hook-like protein familyPFAMPF05622HOOKcoord: 8..65
e-value: 2.3E-9
score: 36.0
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 1..65
e-value: 2.1E-10
score: 42.3
NoneNo IPR availableSUPERFAMILY116907Hook domaincoord: 3..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig54919contigEcto-sp13_S_contig54919:569..763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig54919.15737.1mRNA_Ecto-sp13_S_contig54919.15737.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig54919 569..763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig54919.15737.1 ID=prot_Ecto-sp13_S_contig54919.15737.1|Name=mRNA_Ecto-sp13_S_contig54919.15737.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
LDQVSFNLESFYREGLGFEYPEIELDLTSVARTADADGIAAMVQLLVGAA
VSCQGKADYIQAIMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008636Hook-like_fam
IPR036872CH_dom_sf