prot_Ecto-sp13_S_contig5482.15724.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5482.15724.1
Unique Nameprot_Ecto-sp13_S_contig5482.15724.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5482.15724.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.600e-32
Identity = 68/71 (95.77%), Postives = 68/71 (95.77%), Query Frame = 0 
Query:    1 GVDAGGGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKKGVKALE 71
            G DA GGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKK VKALE
Sbjct:   60 GGDADGGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKKSVKALE 130
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BLAST of mRNA_Ecto-sp13_S_contig5482.15724.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 7.550e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0 
Query:    1 GVDAGGGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKKGVKALE 71
            G +A GGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKK VKALE
Sbjct:   65 GGNADGGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKKSVKALE 135
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BLAST of mRNA_Ecto-sp13_S_contig5482.15724.1 vs. uniprot
Match: S7NUJ5_MYOBR (Nucleolar protein 6 n=2 Tax=Myotis brandtii TaxID=109478 RepID=S7NUJ5_MYOBR)

HSP 1 Score: 47.4 bits (111), Expect = 6.490e-5
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0 
Query:   14 PQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKK 65
            P K +R   Y  PT EE + LRETE  LF  +LLRL+VEELL EVRL   KK
Sbjct:   34 PVKLSRAELYKEPTSEELNRLRETES-LFHSSLLRLQVEELLKEVRLSEKKK 84
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BLAST of mRNA_Ecto-sp13_S_contig5482.15724.1 vs. uniprot
Match: A0A836CBT1_9STRA (Nrap protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT1_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 8.900e-5
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0 
Query:    9 GDGAPPQKRARDA----KYAIPTMEEASLLRETEG---KLFEGNLLRLEVEELLGEVRLDHGKKGVKALE 71
            G+  PP KR +      KYA+PT EEA+ L   +     L  GNLLRLEV ELL EVR+++ KK  K+ E
Sbjct:   21 GEHEPPAKRLKATGVKRKYALPTPEEAAQLLGLDSGSSSLLAGNLLRLEVNELLEEVRVNYDKKSCKSAE 90
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5482.15724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FGX0_ECTSI1.600e-3295.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEV9_9PHAE7.550e-3294.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
S7NUJ5_MYOBR6.490e-557.69Nucleolar protein 6 n=2 Tax=Myotis brandtii TaxID=... [more]
A0A836CBT1_9STRA8.900e-547.14Nrap protein-domain-containing protein n=1 Tax=Tri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5482contigEcto-sp13_S_contig5482:8407..8643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5482.15724.1mRNA_Ecto-sp13_S_contig5482.15724.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5482 8407..8643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5482.15724.1 ID=prot_Ecto-sp13_S_contig5482.15724.1|Name=mRNA_Ecto-sp13_S_contig5482.15724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
GVDAGGGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLE
VEELLGEVRLDHGKKGVKALEVREAIGL*
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