prot_Ecto-sp13_S_contig5480.15719.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5480.15719.1
Unique Nameprot_Ecto-sp13_S_contig5480.15719.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length102
Homology
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A6H5KYB6_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB6_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 1.030e-66
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0
Query:    1 MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            MYVVSTLYTFSWDVLQDWGLGHP+YGFLRKKRLFPR SVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPV+ITTNVIVCEFLRRTMWGFFRVENEH
Sbjct:  206 MYVVSTLYTFSWDVLQDWGLGHPMYGFLRKKRLFPRSSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVVITTNVIVCEFLRRTMWGFFRVENEH 307          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A835ZE89_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE89_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.630e-31
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 0
Query:    1 MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            +Y+VS+LY+F WD+ QDWGLGH  +G+L ++R+  R+ VY+A + +DL+LRFNWLYS IPPG +     H   +P  +TT VI+ E  RRT+WGFFR+ENEH
Sbjct:  688 LYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTS-----HFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEH 784          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A835YP28_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP28_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.740e-29
Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    4 VSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            +++LY+F WDV QDWGLGH  +G+L  +R+  R   YYA + +DLVLRFNWLYS IPPG +     H   LP  +TT VI+ E  RRT+WGFFR+ENEH
Sbjct:  653 LNSLYSFWWDVRQDWGLGHRQFGYLSDRRMQSRRWAYYATIAVDLVLRFNWLYSFIPPGKS-----HFFILPNYVTTLVIILEIFRRTLWGFFRLENEH 746          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A1E7FGH0_9STRA (EXS-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGH0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.290e-28
Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    2 YVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            YVVS LY+FSWDV  DWGLG   YGFL  + ++P+ S+YY  + +DLVLR  W+ S +PP    +       +P  ++   IV E  RRT+WGFFR+ENEH
Sbjct:    1 YVVSALYSFSWDVYMDWGLGRKEYGFLGPRLMYPKKSLYYCVIAMDLVLRSLWVLSFVPPSMGAV-----FAIPQYLSALQIVLELFRRTVWGFFRLENEH 96          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A2D4BK39_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK39_PYTIN)

HSP 1 Score: 110 bits (276), Expect = 3.560e-26
Identity = 53/102 (51.96%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    1 MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            ++ +S+LYT+ WDV  DWGLG P Y FL  +++F R  VYY A+V DLVLRF W  +LIPPG        SS+LP+ +    +V E  RRT WGFFR+ENEH
Sbjct:  896 LFTMSSLYTWVWDVWMDWGLGRPQYKFLGDRQMFSRRWVYYVAIVADLVLRFAWTLTLIPPGS-------SSSLPLYLQPFTMVLELFRRTYWGFFRLENEH 990          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A7S0AKD0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AKD0_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.110e-25
Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            +++ S+LY+FSWDVL DWGLG P + FL  + +FP    YY  +  DLVLRF W+ SLIPP         S  LP  +T   +  E LRRT+WGFFR+E+EH
Sbjct:  205 LFIASSLYSFSWDVLMDWGLGRPEFSFLGPRLMFPNKFYYYGVMAADLVLRFMWVQSLIPPQSGA-----SFELPSYLTAITMALELLRRTLWGFFRLEHEH 301          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A7S0Y6W4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y6W4_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.580e-25
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            ++V+S+L+++ WDV  DWGLG   Y FL +  ++PR S YY  + +DLVLRF W+ +L+PP         S  LP  +T   ++ E  RRT+WGFFR+ENEH
Sbjct:   41 LFVLSSLFSYGWDVYMDWGLGRMRYSFLNQPLMYPRKSYYYFTIAIDLVLRFLWVLTLVPPNSGA-----SFALPEYLTALSMMLELSRRTLWGFFRLENEH 137          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A448ZK33_9STRA (EXS domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK33_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.150e-24
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            ++  S++Y+F+WDV  DWGLG   YGFL  + ++P+   YYA + +DLVLR  W+ +L+PP         S  LP  + +  ++ E  RRT+WGFFR+ENEH
Sbjct:   65 LFFASSIYSFTWDVYMDWGLGRKSYGFLGPRLMYPKKYAYYATIAMDLVLRSMWVLTLLPPSSGA-----SFALPAYLYSLQVILELFRRTVWGFFRLENEH 161          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A1E7FCK4_9STRA (EXS-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCK4_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.600e-24
Identity = 46/101 (45.54%), Postives = 66/101 (65.35%), Query Frame = 0
Query:    2 YVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            +VV++LY F WDV  D+GLG   Y +L +  ++P+ S YY+ + +DLVLRF W+ +L+PP         S  LP  +T  V++ E  RRT+WGFFR+ENEH
Sbjct:    1 FVVTSLYAFIWDVYMDFGLGLKQYSYLNQPLMYPQKSYYYSTIGIDLVLRFLWVSTLVPPDSGA-----SFALPEYLTALVMMLELSRRTLWGFFRLENEH 96          
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Match: A0A7S1UZ92_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ92_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.350e-24
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVENEH 102
            ++V S+LY+F WDV+ DWGLG   + FL  + +FP  S YY  +V+DLVLRF W+ +L+PP            +P  +T   +  E +RRT+WGFFR+ENEH
Sbjct:    2 LFVSSSLYSFWWDVVMDWGLGRKDHWFLGPRLMFPIRSYYYGVMVVDLVLRFMWVLTLLPPQSGA-----KFEIPQYLTAVTMSLELMRRTLWGFFRLENEH 98          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5480.15719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYB6_9PHAE1.030e-6697.06EXS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZE89_9STRA6.630e-3153.92EXS family-domain-containing protein n=1 Tax=Tribo... [more]
A0A835YP28_9STRA2.740e-2955.56EXS family-domain-containing protein n=1 Tax=Tribo... [more]
A0A1E7FGH0_9STRA7.290e-2848.51EXS-domain-containing protein (Fragment) n=1 Tax=F... [more]
A0A2D4BK39_PYTIN3.560e-2651.96Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S0AKD0_9STRA1.110e-2549.02Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S0Y6W4_9STRA3.580e-2545.10Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A448ZK33_9STRA1.150e-2443.14EXS domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A1E7FCK4_9STRA1.600e-2445.54EXS-domain-containing protein (Fragment) n=1 Tax=F... [more]
A0A7S1UZ92_9STRA8.350e-2445.10Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004342EXS, C-terminalPFAMPF03124EXScoord: 2..102
e-value: 7.0E-30
score: 104.5
IPR004342EXS, C-terminalPROSITEPS51380EXScoord: 1..102
score: 16.606
NoneNo IPR availablePANTHERPTHR10783XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATEDcoord: 2..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..102
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 37..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5480contigEcto-sp13_S_contig5480:6885..7383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5480.15719.1mRNA_Ecto-sp13_S_contig5480.15719.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5480 6885..7383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5480.15719.1 ID=prot_Ecto-sp13_S_contig5480.15719.1|Name=mRNA_Ecto-sp13_S_contig5480.15719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp
MYVVSTLYTFSWDVLQDWGLGHPVYGFLRKKRLFPRLSVYYAAVVLDLVL
RFNWLYSLIPPGHNPLPFMHSSTLPVMITTNVIVCEFLRRTMWGFFRVEN
EH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004342EXS_C