prot_Ecto-sp13_S_contig5478.15716.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5478.15716.1
Unique Nameprot_Ecto-sp13_S_contig5478.15716.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length146
Homology
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: D7FZH9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.790e-48
Identity = 94/154 (61.04%), Postives = 113/154 (73.38%), Query Frame = 0
Query:    1 MEGRVDDAFVMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHDHGTMHWLPRVGFNFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVGQK--------IILTTEYR 146
            ++  VDD F MS++L+ +  SGVP+  I L  GVVVMLCRN+SI + LTN TKVVV+ I+P  L++QTL DHG M WLPR+ FNFVT QGVA KRV FP+RLCF +TV+RAQGQTLD+TC+DL   PFAHGHLYVG          IILTT  R
Sbjct:  478 LDPDVDDFFRMSQFLNQMEHSGVPSHDINLNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQTL-DHGKMFWLPRIAFNFVTDQGVAVKRVQFPVRLCFCLTVHRAQGQTLDKTCIDLTRHPFAHGHLYVGLSRVRKSDDIIILTTSDR 630          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: A0A6H5KSD8_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD8_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.790e-29
Identity = 72/134 (53.73%), Postives = 85/134 (63.43%), Query Frame = 0
Query:   21 SGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHDHGTMHWLPRVGFNFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVGQK--------IILTTEYR 146
            SG+P+  I+LK GVVV LCRNMSI  RLTN TKVVV +I+ + L+V+ L D                  GVA KR+HFP+RL F +TV+RAQGQTLD+TC DL   PFAHGHLYVG          IILTT  R
Sbjct:  437 SGIPSHEIKLKVGVVVRLCRNMSIDARLTNGTKVVVQEIQSYTLRVKNLKD------------------GVAVKRIHFPVRLWFCLTVHRAQGQTLDKTCFDLTRHPFAHGHLYVGLSRVRKADDVIILTTPDR 552          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: A0A6H5J9S3_9PHAE (Herpes_Helicase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S3_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.080e-24
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   37 MLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHDHGTMHWLPRVGFNFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVG 136
            ML RN+ I   L N TK+VVL I    L+ + L D G  H++PR+ F F+T QGVA KRV FP+RLCF +T++++QGQTLD+   D   D F HG LYV 
Sbjct:    1 MLTRNLDISNGLCNSTKLVVLHITNFTLRAKNLKD-GVEHFIPRITFGFITRQGVAVKRVQFPVRLCFAITIHKSQGQTLDKVLFDNRTDVFMHGCLYVA 99          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: UPI001ED89BAA (ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89BAA)

HSP 1 Score: 93.6 bits (231), Expect = 1.950e-19
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 0
Query:    3 GRVDDAFVMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHDHGTMHWLPRVGFNF-VTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVG 136
            G VD+  + S+ L+ ++ SGVP   + LK G V +L RN+S  +RL N TKV+V  I    ++ +  +   T+  +PR+ F F V+  G+   R  FPL++ + VT+N++QGQTL++  +DL  D F+HG LYV 
Sbjct:  412 GAVDNTLIHSDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVIVEKISRRFIEARIPNATDTV-MIPRIPFKFAVSNSGIEMIRKQFPLKVAYGVTINKSQGQTLEKVGVDLRSDVFSHGQLYVA 545          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: A0A4Y2QLF3_ARAVE (ATP-dependent DNA helicase n=11 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QLF3_ARAVE)

HSP 1 Score: 89.7 bits (221), Expect = 5.340e-19
Identity = 50/142 (35.21%), Postives = 82/142 (57.75%), Query Frame = 0
Query:    6 DDAFVMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLH--DHGTMHWLPRVG---------FNFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVG 136
            D      E+L+ LT +G+P   +RLK G ++ML RN++  + L N T+++V+ ++ +V+  + +   ++   + +PR+          F F        KR  FP+RL F++T+N+AQGQT D+ CLDL    F+HG LYVG
Sbjct:  101 DQLAYTEEFLNSLTPTGMPPHKLRLKPGAIIMLLRNLAPYKGLYNGTRLIVIQLQKNVIVAKNISADNNNESYLIPRIPLIPSDSNMPFQF--------KRKQFPIRLAFSMTINKAQGQTFDKICLDLTKPVFSHGQLYVG 234          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: E3LKN2_CAERE (ATP-dependent DNA helicase n=7 Tax=Caenorhabditis remanei TaxID=31234 RepID=E3LKN2_CAERE)

HSP 1 Score: 92.4 bits (228), Expect = 5.620e-19
Identity = 50/137 (36.50%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    3 GRVDDAF-VMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHD--HGTMHWLPRVGFNFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVG 136
            G ++D+    +E+L+ +T SG+P   +RLKKG +VML RN+ +   L N T++VV D+   VLQ + ++    G M ++P++  N+         R+ FP+RL F +T+N++QGQT ++  L +    F+HG LYV 
Sbjct: 1463 GEINDSLNFTTEFLNQMTPSGMPPHLLRLKKGAIVMLLRNLDVKNSLCNGTRLVVDDMGARVLQCKFINGPRQGQMVFIPKIKLNYEKGLPFIMSRLQFPIRLSFAMTINKSQGQTFEKIGLKVDEPIFSHGQLYVA 1599          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: E3MWC4_CAERE (ATP-dependent DNA helicase n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=E3MWC4_CAERE)

HSP 1 Score: 92.4 bits (228), Expect = 5.700e-19
Identity = 50/137 (36.50%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    3 GRVDDAF-VMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHD--HGTMHWLPRVGFNFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVG 136
            G ++D+    +E+L+ +T SG+P   +RLKKG +VML RN+ +   L N T++VV D+   VLQ + ++    G M ++P++  N+         R+ FP+RL F +T+N++QGQT ++  L +    F+HG LYV 
Sbjct: 1493 GEINDSLNFTTEFLNQMTPSGMPPHLLRLKKGAIVMLLRNLDVKNSLCNGTRLVVDDMGARVLQCKFINGPRQGQMVFIPKIKLNYEKGLPFIMSRLQFPIRLSFAMTINKSQGQTFEKIGLKVDEPIFSHGQLYVA 1629          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: A0A4Y2FD26_ARAVE (ATP-dependent DNA helicase n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2FD26_ARAVE)

HSP 1 Score: 87.4 bits (215), Expect = 1.040e-18
Identity = 49/137 (35.77%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    6 DDAFVMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLH--DHGTMHWLPRVGF----NFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVG 136
            D      E+L+ LT +G+P   +RLK   ++ML RN++  + L N T+++V+ ++ +VL  + +   ++   + +PR+      + + +Q    KR  FP+RL F++T+N+AQGQT D+ CLDL    F+HG LYVG
Sbjct:   31 DQLAYTEEFLNSLTPTGMPPHKLRLKPEAIIMLLRNLAPSKGLCNGTRLIVIQLQKNVLVAKKISADNNNESYLIPRIPLIPSDSSMPFQ---FKRKQFPIRLAFSMTINKAQGQTFDKICLDLTKPVFSHGQLYVG 164          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: A0A6J1TK21_FRAOC (ATP-dependent DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TK21_FRAOC)

HSP 1 Score: 90.1 bits (222), Expect = 1.410e-18
Identity = 52/130 (40.00%), Postives = 75/130 (57.69%), Query Frame = 0
Query:    9 FVMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHDHGTMHWLPRVGFNF--VTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVG 136
            F+  E L   T  GVP   +R+KKG V M+ RN++  + L N +KV+V+D+ P ++ V+       M  +PR+ F F  V    +   R  FPLRL +  TV+++QG TLD+  +DL  DPFAHG LY  
Sbjct:  198 FIDDELLHQATGKGVPPHMLRIKKGAVCMITRNLNSDDGLVNGSKVIVVDVTPRLVIVRLPGSQERMG-IPRITFKFPIVRDSPLVVTRRQFPLRLAYACTVHKSQGLTLDKVAVDLRTDPFAHGLLYTA 326          
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Match: E3NTP2_CAERE (ATP-dependent DNA helicase n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=E3NTP2_CAERE)

HSP 1 Score: 90.9 bits (224), Expect = 1.880e-18
Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 0
Query:    6 DDAFVMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTNDTKVVVLDIKPHVLQVQTLHD--HGTMHWLPRVGFNFVTWQGVAAKRVHFPLRLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVGQKIILTTE 144
            D     +E+L+ +T SG+P   +RLKKG +VML RN+ +   L N T+ VV+++   VLQ + +     G    +PR+  N+         R+ FPLRL F +T+N++QGQT D+  L L    F+HG LYV      T E
Sbjct:  904 DSMHFTTEFLNKMTPSGMPPHELRLKKGAIVMLLRNLDVKNSLCNGTRFVVVEMGDRVLQCKFVSGARQGQTVLIPRIKLNYEKNLPFTMSRLQFPLRLSFAMTINKSQGQTFDKIGLRLDEPIFSHGQLYVALSRTTTRE 1044          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5478.15716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH9_ECTSI1.790e-4861.04ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KSD8_9PHAE2.790e-2953.73ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5J9S3_9PHAE1.080e-2451.00Herpes_Helicase domain-containing protein n=1 Tax=... [more]
UPI001ED89BAA1.950e-1939.26ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischn... [more]
A0A4Y2QLF3_ARAVE5.340e-1935.21ATP-dependent DNA helicase n=11 Tax=Araneus ventri... [more]
E3LKN2_CAERE5.620e-1936.50ATP-dependent DNA helicase n=7 Tax=Caenorhabditis ... [more]
E3MWC4_CAERE5.700e-1936.50ATP-dependent DNA helicase n=1 Tax=Caenorhabditis ... [more]
A0A4Y2FD26_ARAVE1.040e-1835.77ATP-dependent DNA helicase n=3 Tax=Araneus ventric... [more]
A0A6J1TK21_FRAOC1.410e-1840.00ATP-dependent DNA helicase n=1 Tax=Frankliniella o... [more]
E3NTP2_CAERE1.880e-1837.59ATP-dependent DNA helicase n=1 Tax=Caenorhabditis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 22..135
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 27..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5478contigEcto-sp13_S_contig5478:2902..3339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5478.15716.1mRNA_Ecto-sp13_S_contig5478.15716.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5478 2432..3339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5478.15716.1 ID=prot_Ecto-sp13_S_contig5478.15716.1|Name=mRNA_Ecto-sp13_S_contig5478.15716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp
MEGRVDDAFVMSEYLSHLTVSGVPAITIRLKKGVVVMLCRNMSILERLTN
DTKVVVLDIKPHVLQVQTLHDHGTMHWLPRVGFNFVTWQGVAAKRVHFPL
RLCFTVTVNRAQGQTLDRTCLDLMLDPFAHGHLYVGQKIILTTEYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase