prot_Ecto-sp13_S_contig54775.15715.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig54775.15715.1
Unique Nameprot_Ecto-sp13_S_contig54775.15715.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp13_S_contig54775.15715.1 vs. uniprot
Match: Q8QNA3_ESV1K (EsV-1-184 n=2 Tax=root TaxID=1 RepID=Q8QNA3_ESV1K)

HSP 1 Score: 237 bits (604), Expect = 9.030e-77
Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 0
Query:    1 MKVHPDYMEEPVDDEKVETVDLEALDRPQNIFAQEYGADTMTQARENRERLARITSKTNKHAVDPGLQVGTNARLSHFEKEKLYQNDWNNSVLDLMENLLYECTQSSKAHAEAARGCRRKYRMLMIPSIIVA 132
            MKVHPD ME PV +EKVETVDLEALD P+NIF+QEYGADTM QARENRERLARITSKT KH VDPGLQVGTNARLSHF+KEKLYQNDWNNSVLDLMENLLYECTQSSKAHAEAARGCRRKYRMLMIPSIIVA
Sbjct:    1 MKVHPDNME-PVREEKVETVDLEALDGPENIFSQEYGADTMAQARENRERLARITSKTKKHTVDPGLQVGTNARLSHFQKEKLYQNDWNNSVLDLMENLLYECTQSSKAHAEAARGCRRKYRMLMIPSIIVA 131          
BLAST of mRNA_Ecto-sp13_S_contig54775.15715.1 vs. uniprot
Match: B5LWK0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK0_9PHYC)

HSP 1 Score: 81.3 bits (199), Expect = 1.860e-16
Identity = 41/79 (51.90%), Postives = 60/79 (75.95%), Query Frame = 0
Query:   73 ARLSHFEKEKLYQNDWNNSVLDLMENLLYECTQSSKAHAEAARGCRRKYRMLMIPSIIVATAATSASFFAAGGSPCGED 151
            ARLS+FE E++++NDW N+ LDL+E L  +C  +S A+A+AAR  R K+R + IP+I+VA+ AT+ SFF+AG S C +D
Sbjct:    6 ARLSNFEAERVFENDWTNASLDLLEGLHKQCKDNSSAYADAARVARWKHRAVSIPTIVVASFATATSFFSAGSS-CDDD 83          
BLAST of mRNA_Ecto-sp13_S_contig54775.15715.1 vs. uniprot
Match: Q6XM51_9PHYC (FirrV-1-A36 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM51_9PHYC)

HSP 1 Score: 79.7 bits (195), Expect = 7.650e-16
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 0
Query:   74 RLSHFEKEKLYQNDWNNSVLDLMENLLYECTQSSKAHAEAARGCRRKYRMLMIPSIIVATAATSASFFAAGGS 146
            RLS FE EK++ N W N+ +DL+E++  +C  ++ A+A AAR  R KYRML IPSI+VA+ AT+ SFF+AG S
Sbjct:   10 RLSAFEAEKIFDNGWTNASMDLLEDMCKQCRTNASAYARAARTARWKYRMLSIPSIVVASFATATSFFSAGSS 82          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig54775.15715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q8QNA3_ESV1K9.030e-7791.67EsV-1-184 n=2 Tax=root TaxID=1 RepID=Q8QNA3_ESV1K[more]
B5LWK0_9PHYC1.860e-1651.90Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM51_9PHYC7.650e-1653.42FirrV-1-A36 n=1 Tax=Feldmannia irregularis virus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..154
NoneNo IPR availableTMHMMTMhelixcoord: 123..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig54775contigEcto-sp13_S_contig54775:471..932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig54775.15715.1mRNA_Ecto-sp13_S_contig54775.15715.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig54775 471..932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig54775.15715.1 ID=prot_Ecto-sp13_S_contig54775.15715.1|Name=mRNA_Ecto-sp13_S_contig54775.15715.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
MKVHPDYMEEPVDDEKVETVDLEALDRPQNIFAQEYGADTMTQARENRER
LARITSKTNKHAVDPGLQVGTNARLSHFEKEKLYQNDWNNSVLDLMENLL
YECTQSSKAHAEAARGCRRKYRMLMIPSIIVATAATSASFFAAGGSPCGE
DGGS
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