prot_Ecto-sp13_S_contig54769.15713.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig54769.15713.1
Unique Nameprot_Ecto-sp13_S_contig54769.15713.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length256
Homology
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BLAST of mRNA_Ecto-sp13_S_contig54769.15713.1 vs. uniprot
Match: Q8QNQ4_ESV1K (EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ4_ESV1K)

HSP 1 Score: 305 bits (780), Expect = 8.340e-101
Identity = 162/255 (63.53%), Postives = 188/255 (73.73%), Query Frame = 0 
Query:    1 RVALKTLEEAGASGDTSDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYKSSGE-KVGHGVQGVVSGVINHPDKVVKRFRTFSQLGHTSITTRQFIYDKTASDNGFGPKIYEISSNDRVVDLSDKSTVPKFHRGRIFSVVMERLAGI----EMDKQYVGIVHLWKKMRQHGLFSGDGFYGYSLQHKAIVHADFGAVWETKNDEEFKDAMYQHLEERYDSGGLEPGIARRYADEFPEDPFTQDILVSVL 250
            RVALKTLEEAGASGDTSDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYK   E  VGHGVQG+V  VINHPDKVVKR+          +TT+QF+YD+ A + GFGP+IYEISS+ RV+DLSDKST+PKF +G I SVVME++  +    E+ K   GIV +WKKMRQ GL + DGFY +SL+ KAIV  DFG V E  ND+ F D MY+  +     G  +PGIA +Y  E PED FT+ IL   L
Sbjct:   45 RVALKTLEEAGASGDTSDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYKFRKEASVGHGVQGIVYHVINHPDKVVKRYSVRRPGTLAFLTTKQFVYDRIACEQGFGPQIYEISSDGRVIDLSDKSTIPKFEKGLIISVVMEKIEKMTDQEELLKNSGGIVGVWKKMRQGGLLNVDGFYAHSLKQKAIVAGDFGVVEEATNDQMFIDKMYEFFDSCLSIGANDPGIALKYEKEHPEDSFTKLILKPAL 299
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig54769.15713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNQ4_ESV1K8.340e-10163.53EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig54769contigEcto-sp13_S_contig54769:3..770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig54769.15713.1mRNA_Ecto-sp13_S_contig54769.15713.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig54769 3..770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig54769.15713.1 ID=prot_Ecto-sp13_S_contig54769.15713.1|Name=mRNA_Ecto-sp13_S_contig54769.15713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp
RVALKTLEEAGASGDTSDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWH
NQVSKYKSSGEKVGHGVQGVVSGVINHPDKVVKRFRTFSQLGHTSITTRQ
FIYDKTASDNGFGPKIYEISSNDRVVDLSDKSTVPKFHRGRIFSVVMERL
AGIEMDKQYVGIVHLWKKMRQHGLFSGDGFYGYSLQHKAIVHADFGAVWE
TKNDEEFKDAMYQHLEERYDSGGLEPGIARRYADEFPEDPFTQDILVSVL
ANLGI*
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