prot_Ecto-sp13_S_contig54736.15709.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig54736.15709.1
Unique Nameprot_Ecto-sp13_S_contig54736.15709.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 4.010e-37
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query:   15 RAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 78
            RAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF
Sbjct:  192 RAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: A0A2P6N721_9EUKA (Cleavage and polyadenylation specificity factor subunit 1-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N721_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 5.470e-9
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   11 GITSRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDL 74
            G+  R YR        R E + +MLDG L+W+++ LD   Q  L RAIGTT ++++ N++DIDL
Sbjct: 1221 GLNPRGYRATGRRKMTRNEARNDMLDGDLIWQYLSLDHIDQRRLARAIGTTQEQILRNMMDIDL 1284          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: A0A8H7S4A0_9FUNG (CPSF_A domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S4A0_9FUNG)

HSP 1 Score: 56.2 bits (134), Expect = 2.330e-7
Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   11 GITSRAYRLFDHGPTFRYETKQN--MLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 73
            G+  RA+RL   GP  R  + +   +LDG+L++ F GL    Q ++T+ IGTTV R+M +L+DID
Sbjct: 1320 GLNPRAFRLIK-GPKHRMSSNRTKAVLDGNLIFEFAGLSVNKQREMTKQIGTTVARIMEDLVDID 1383          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: A0A1Y2GUT6_9FUNG (CPSF A subunit region-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GUT6_9FUNG)

HSP 1 Score: 53.9 bits (128), Expect = 1.520e-6
Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    3 VNTNNPSPGITSRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 76
            VN    + G+  R++RL        Y   +++LDG LL+ F+   A  Q ++T+ IGT VDRVM +L  I +A+
Sbjct: 1358 VNGVQQAAGLNPRSFRLLQSKDRLNYNPVKSILDGDLLFEFINQPANRQKEMTKQIGTGVDRVMDDLAGISVAA 1431          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: I1BTD1_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BTD1_RHIO9)

HSP 1 Score: 53.9 bits (128), Expect = 1.520e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   11 GITSRAYRLFDHGPTFRYETKQN--MLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 73
            G+  RA+RL   GP  R  T +   +LDG L++ F GL  + Q + T+ IGTTV R+M +L+DI+
Sbjct: 1399 GLNPRAFRLIK-GPKQRMSTNRTKAVLDGDLIFEFAGLSIEEQKETTKQIGTTVTRIMEDLVDIE 1462          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: A0A8H7V0B5_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V0B5_9FUNG)

HSP 1 Score: 53.9 bits (128), Expect = 1.530e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   11 GITSRAYRLFDHGPTFRYETKQN--MLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 73
            G+  RAYRL   GP  R  + +   +LDG L++ F GL  + Q + T+ IGTTV R+M +L+DI+
Sbjct: 1481 GLNPRAYRLIK-GPKQRMASNRTKAVLDGDLIFEFAGLSIERQKETTKQIGTTVSRIMEDLVDIE 1544          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: S2J7X7_MUCC1 (Uncharacterized protein n=4 Tax=Mucor TaxID=4830 RepID=S2J7X7_MUCC1)

HSP 1 Score: 53.5 bits (127), Expect = 2.090e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   11 GITSRAYRLFDHGPTFRYETKQN--MLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 73
            G+  RAYRL   GP  R  + +   +LDG L++ F GL  + Q + T+ IGTTV R+M +L+DI+
Sbjct: 1514 GLNPRAYRLIK-GPKQRMASNRTKAVLDGDLIFEFAGLSIERQKETTKQIGTTVPRIMEDLVDIE 1577          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: A0A068SD23_9FUNG (Cleavage and polyadenylation specificity factorsubunit 1 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068SD23_9FUNG)

HSP 1 Score: 52.0 bits (123), Expect = 7.290e-6
Identity = 25/65 (38.46%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   11 GITSRAYRLFD-HGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDL 74
            G+  RA+RL   H         + +LDG L++ F GL    Q ++T+ IGTTV R+M +L++ID+
Sbjct: 1465 GLNPRAFRLIKGHKQRMSSNRTKAVLDGDLIFEFAGLSVGQQREMTKQIGTTVTRIMEDLVEIDI 1529          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: A0A7S1BI36_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI36_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 9.610e-6
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    9 SPGITSRAYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASL 77
            S  +  R +RLF      G     E ++ +LDG LL R+  L    Q ++ RAIGTTVD +M NLL++D A +
Sbjct:  470 SGALNVRGWRLFQRTTQRGACRSGERQKGVLDGGLLMRYCQLGYFQQEEIARAIGTTVDMIMDNLLELDCARM 542          
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Match: UPI001E1DCDC7 (cleavage and polyadenylation specificity factor subunit 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCDC7)

HSP 1 Score: 51.2 bits (121), Expect = 1.360e-5
Identity = 21/63 (33.33%), Postives = 39/63 (61.90%), Query Frame = 0
Query:   11 GITSRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 73
            G+  RAYR   +         +N+LDG LLW+F+ L    + ++ + IGT+VD+++ +L+++D
Sbjct: 1359 GLNPRAYRAVRNNSLDLSNAHKNILDGELLWKFLHLSVLEKSEMAKRIGTSVDQLVEDLMEVD 1421          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig54736.15709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G8W9_ECTSI4.010e-37100.00CPSF_A domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A2P6N721_9EUKA5.470e-942.19Cleavage and polyadenylation specificity factor su... [more]
A0A8H7S4A0_9FUNG2.330e-743.08CPSF_A domain-containing protein n=1 Tax=Mucor cir... [more]
A0A1Y2GUT6_9FUNG1.520e-636.49CPSF A subunit region-domain-containing protein n=... [more]
I1BTD1_RHIO91.520e-643.08Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
A0A8H7V0B5_9FUNG1.530e-643.08Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
S2J7X7_MUCC12.090e-643.08Uncharacterized protein n=4 Tax=Mucor TaxID=4830 R... [more]
A0A068SD23_9FUNG7.290e-638.46Cleavage and polyadenylation specificity factorsub... [more]
A0A7S1BI36_9STRA9.610e-639.73Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
UPI001E1DCDC71.360e-533.33cleavage and polyadenylation specificity factor su... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig54736contigEcto-sp13_S_contig54736:307..543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig54736.15709.1mRNA_Ecto-sp13_S_contig54736.15709.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig54736 307..543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig54736.15709.1 ID=prot_Ecto-sp13_S_contig54736.15709.1|Name=mRNA_Ecto-sp13_S_contig54736.15709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
NKVNTNNPSPGITSRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKT
QHDLTRAIGTTVDRVMANLLDIDLASLF*
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