prot_Ecto-sp13_S_contig54691.15702.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig54691.15702.1
Unique Nameprot_Ecto-sp13_S_contig54691.15702.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length71
Homology
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BLAST of mRNA_Ecto-sp13_S_contig54691.15702.1 vs. uniprot
Match: D8LTK3_ECTSI (Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTK3_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.240e-10
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:   16 FLLFLMVASTFGRLACCPILSQVPLTNLPVCLDGYSLAMVSDLHAGPTVGRSEV 69
            F++ + VAS  G         +VPL NLP CLDGYSLAMVSDLHAGPTVG+SE+
Sbjct:  210 FVILVAVASVQGSRDPVTRTVEVPLANLPACLDGYSLAMVSDLHAGPTVGKSEM 263
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig54691.15702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTK3_ECTSI1.240e-1061.11Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.881
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig54691contigEcto-sp13_S_contig54691:346..558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig54691.15702.1mRNA_Ecto-sp13_S_contig54691.15702.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig54691 346..558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig54691.15702.1 ID=prot_Ecto-sp13_S_contig54691.15702.1|Name=mRNA_Ecto-sp13_S_contig54691.15702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp
SCSIGKDRRFNLFLAFLLFLMVASTFGRLACCPILSQVPLTNLPVCLDGY
SLAMVSDLHAGPTVGRSEVR*
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