prot_Ecto-sp13_S_contig5464.15693.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5464.15693.1
Unique Nameprot_Ecto-sp13_S_contig5464.15693.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length343
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5464.15693.1 vs. uniprot
Match: D8LT46_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT46_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 3.990e-92
Identity = 209/262 (79.77%), Postives = 217/262 (82.82%), Query Frame = 0 
Query:    1 ALLHFSETTEAQTLEMLFREGGDPLLFQSHSKTFAAELIMATMEPKVIRKEPXXXXXXXXXXXXXXXXXXXXXXXXGYPRQGDQSQESDARWREGDPGYRDGGGGRGGGASQDSEATRTPASHDQGFDHNPFGEQEPTTAGEGYTDGSASPSRRRGRVHDRLDGNEGEQQHRLDGGSYENDQSGXXXXXXXXXXXHDGGYEEERQARLGDGINNGRRRGASSDHYGTRKQHGDPGWEQEERGVEGGGVEGPEEAED-DVQQR 261
            ALLHFSETTEAQTLEMLFREGGDPLLFQSHSK+FAAELIMATMEPKVIRKEPXXXXXXXXXXXXXXXXXXXXXXXX Y RQGDQSQESDAR REGDPGYRDGGGGRGGGASQDSEATRTPASH+QGF HNPFGEQ PTT GEGYTDG ASPSRRRGRV    DGNEGEQ               XXXXXXXX    D GY+EERQARLGDG +NGRRRGAS DH GTR+++GD GWEQ     EG GV GPEE E+ D QQR
Sbjct:  251 ALLHFSETTEAQTLEMLFREGGDPLLFQSHSKSFAAELIMATMEPKVIRKEPXXXXXXXXXXXXXXXXXXXXXXXXXYSRQGDQSQESDARCREGDPGYRDGGGGRGGGASQDSEATRTPASHEQGFHHNPFGEQLPTTTGEGYTDGPASPSRRRGRV----DGNEGEQXXXXXXXXX---XXXXXXXXXXXDGYRDSGYDEERQARLGDGRSNGRRRGASGDHDGTREKYGDLGWEQ----AEGRGVGGPEEEEEEDAQQR 501
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BLAST of mRNA_Ecto-sp13_S_contig5464.15693.1 vs. uniprot
Match: A0A6H5JVD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD6_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 8.360e-79
Identity = 175/279 (62.72%), Postives = 184/279 (65.95%), Query Frame = 0 
Query:   16 MLFREGGDPLLFQSHSKTFAAELIMATMEPKVIRKEPXXXXXXXXXXXXXXXXXXXXXXXXGYPRQGDQSQESDARWREGDPGYRDGGGGRGGGASQDSEATRTPASHDQGFDHNPFGEQEPTTAGEGYTDGSASPSRRRGRVHDRLDGNEGEQQHRLDGGSYENDQSGXXXXXXXXXXXHDGGYEEERQARLGDGINNGRRRGASSDHYGTRKQHGDPGWEQEERGVEGGGVEGPEEAED-DVQQRDSELPTQFPGVREAFXXXXXXXXXXLGNDEDG 293
            MLFREGGDPLLFQSHSKTFAAELIMATMEPKVIRKEP                                                          + DSEATRTPASHDQGFDHNPFGEQ P TAGEGYTD SASPSRRRGRVHDRL GNEGEQ               XXXXXXXX     GGYEEERQARLGDG +NGRRR ASSDH  TR+Q+GDPGWEQEERGV+ GG+ GP++    D QQRDSELPTQFPGVREAF XXXXXXXXX+GNDEDG
Sbjct:    1 MLFREGGDPLLFQSHSKTFAAELIMATMEPKVIRKEPPP--------------------------------------------------------TADSEATRTPASHDQGFDHNPFGEQLPATAGEGYTDRSASPSRRRGRVHDRLGGNEGEQXXXXXXXXXXXXXXXXXXXXXXXDGYRVGGYEEERQARLGDGRSNGRRR-ASSDHDLTREQYGDPGWEQEERGVQRGGLGGPDDXXXXDAQQRDSELPTQFPGVREAFEXXXXXXXXXVGNDEDG 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5464.15693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT46_ECTSI3.990e-9279.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JVD6_9PHAE8.360e-7962.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5464contigEcto-sp13_S_contig5464:15..1550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5464.15693.1mRNA_Ecto-sp13_S_contig5464.15693.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5464 15..1550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5464.15693.1 ID=prot_Ecto-sp13_S_contig5464.15693.1|Name=mRNA_Ecto-sp13_S_contig5464.15693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp
ALLHFSETTEAQTLEMLFREGGDPLLFQSHSKTFAAELIMATMEPKVIRK
EPPPPTAVAAGGAKREPGTAAGSGGGGYPRQGDQSQESDARWREGDPGYR
DGGGGRGGGASQDSEATRTPASHDQGFDHNPFGEQEPTTAGEGYTDGSAS
PSRRRGRVHDRLDGNEGEQQHRLDGGSYENDQSGGGGGGGGGGGCHDGGY
EEERQARLGDGINNGRRRGASSDHYGTRKQHGDPGWEQEERGVEGGGVEG
PEEAEDDVQQRDSELPTQFPGVREAFESELPTQFPGLGNDEDGGPGGGGG
GGGGKARRGGNREVDEEEEEEDGGPVQGSKRRRRVVNEEEEE*
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