prot_Ecto-sp13_S_contig54630.15691.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig54630.15691.1
Unique Nameprot_Ecto-sp13_S_contig54630.15691.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length42
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig54630.15691.1 vs. uniprot
Match: D7G472_ECTSI (Meiosis-specific nuclear structural protein 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G472_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.470e-13
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    6 QVVKEARRRLLEQHGAAVEGYLPKGALKSRDELELVR 42
            +VV+EARRRLLEQHGAAVEGYLPKGALKSRDELELVR
Sbjct:  393 RVVEEARRRLLEQHGAAVEGYLPKGALKSRDELELVR 429
[Close]
BLAST of mRNA_Ecto-sp13_S_contig54630.15691.1 vs. uniprot
Match: A0A835Z6N9_9STRA (Meiosis-specific nuclear structural protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6N9_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.360e-8
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    7 VVKEARRRLLEQHGAAVEGYLPKGALKSRDELELVR 42
            VV EAR+RLLEQH AA+EGYLPKGA+KS +ELE VR
Sbjct:  486 VVAEARKRLLEQHAAALEGYLPKGAVKSAEELEYVR 521
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig54630.15691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G472_ECTSI4.470e-1394.59Meiosis-specific nuclear structural protein 1 n=2 ... [more]
A0A835Z6N9_9STRA1.360e-877.78Meiosis-specific nuclear structural protein 1 n=1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig54630contigEcto-sp13_S_contig54630:711..836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig54630.15691.1mRNA_Ecto-sp13_S_contig54630.15691.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig54630 711..836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig54630.15691.1 ID=prot_Ecto-sp13_S_contig54630.15691.1|Name=mRNA_Ecto-sp13_S_contig54630.15691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
MILSLQVVKEARRRLLEQHGAAVEGYLPKGALKSRDELELVR
back to top