prot_Ecto-sp13_S_contig5461.15687.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5461.15687.1
Unique Nameprot_Ecto-sp13_S_contig5461.15687.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length376
Homology
BLAST of mRNA_Ecto-sp13_S_contig5461.15687.1 vs. uniprot
Match: A0A6H5KVB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB5_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 5.150e-135
Identity = 310/756 (41.01%), Postives = 333/756 (44.05%), Query Frame = 0
Query:    1 SQLRFRSLSPGVDGGSSGSGSASATTLWRRRVGALEVQVAARHPNRGHLLHAQVIHSKLASGRWPRLGTSMCLPNRLRRALESWGFETDRREVDGARKDENST----------------------------------------------------------------------ADGAGGGTPSAQHRPRPRVLIPWEFDHRDRMRRGDEVATSRRQGARVPDKRAHTDDYHDNSMIRGGARTTPATANQIATNNHDFHGKGSNEPSTSGENGSETGNDGDRRRSGRSPERPGMPTTTLPDCKDDGCSPLRGREAHGKEVAGVLAQENSSKAAEMGEDSL-----------------------------------------------------------------------------------------------------------------------------------------------GEGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------DALAGPVRAKERENDISAEEDEYDADFASQAEDSLVEEVDEDAADAAPGPSPFVAPKKIDGIHENDEGELEDAMWDQDAEEWEEXXXXXXXXXXEYGDDFDS 375
            S LR R+LSPG DG           TL RRRVGALEVQVAARHPNRGH LHAQVIHSKLASGRWPRLGTS CLPNR+RRALESWGF+TD+RE+ G RKDEN T                                                                      ADGAG  TPSAQHRPRPRVLIPWEFD+RDRM RGDEV TSRRQGAR+PDK AHTD Y+DNS IRGGARTTPATA +IATNNHDFHGK SN+P+TSGENGS+TGNDGDRRRSGR+PERPGM TTT+PD +DDGCSP RGREA+G   AGVL QENSSKAAE+GEDS+                                                                                                                                               GE G                                                                                                                                                                        DA+ GPVRA+E ENDISAEEDEYDADFASQAEDSLVEEVDEDAADAAPGP PFVAPK+ID +HENDE ELEDA+WDQDAEEWEEXXXXXXXXXXEYGDDFDS
Sbjct:  121 SPLRSRTLSPGGDGXXXXXXXXXXXTLRRRRVGALEVQVAARHPNRGHQLHAQVIHSKLASGRWPRLGTSTCLPNRVRRALESWGFKTDKREIGGTRKDENITGEAGVVTKTNPLQTQTRKMIWYIVELRIVQHDSLQELLRSLFGGCFNMDNVTVEAKRWAQCLISLSSPGSADGAGADTPSAQHRPRPRVLIPWEFDNRDRMHRGDEVTTSRRQGARIPDKHAHTDGYNDNSKIRGGARTTPATAEEIATNNHDFHGKVSNKPTTSGENGSDTGNDGDRRRSGRNPERPGMTTTTVPDSRDDGCSPSRGREANGTVAAGVLGQENSSKAAEVGEDSVALVDGVATAPGGGADGKPSPRTNPAITTTTIAAPSSLERREEEIGTNEKAIVHEGIRHSQTVAPEAEIHFGDGSFEAAGLEELVEDCSAGGSCSHSNGQKKDQLSCENRGSASRIAADSGSCNNRDDKTNSTSSKQTPASSITGETGHQLEPVPRTGQDFTSGVVRTSERWNKGAKAAVMNDISDAGRRNLGSQPAVEEAATRGGGTREEQTLVVANAANATDDLDFHWESGSHSSCDRSSCGDSTTHSDPSHSRTDGAESLFRSAVEPQDSRTSRGGTIGPVVQSDSIVQSSSTNSNXXSSNGHRGRADVRVTRDAVGGPVRAEEGENDISAEEDEYDADFASQAEDSLVEEVDEDAADAAPGPPPFVAPKEIDSMHENDEEELEDAIWDQDAEEWEEXXXXXXXXXXEYGDDFDS 876          
BLAST of mRNA_Ecto-sp13_S_contig5461.15687.1 vs. uniprot
Match: D8LBW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBW1_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 3.750e-130
Identity = 248/380 (65.26%), Postives = 261/380 (68.68%), Query Frame = 0
Query:    1 SQLRFRSLSPGVDGGSSGSGSASATTLWRRRVGALEVQVAARHPNRGHLLHAQVIHSKLASGRWPRLGTSMCLPNRLRRALESWGFETDRREVDGARKDENSTADGAGGGTPSAQHRPRPRVLIPWEFDHRDRMRRGDEVATSRRQGARVPDKRAHTDDYHDNSMIRGGARTTPATANQIATNNHDFHGKGSNEPSTSGENGSETGNDGDRRRSGRSPERPGMPTTTLPDCKDDGCSPL---RGREAHGKEVAGVLAQENSSKAAEMGEDSLGEGGDALAGPVRAKERENDISAEEDEYDADFASQAEDSLVEEVDEDAADAAPGPSPFVAPKKIDGIHENDEGELEDAMWDQDAEEWEEXXXXXXXXXX--EYGDDFDS 375
            S LR R+LSPG DG           TL RRRVGALEVQVAARHPNRGHLLHAQVIHSKLASGRWPRLGTS+CLPNRLRRALESWGFETD RE+DG RK ENST DGAG  TPSAQH PRPRV IPWEFDHRDRMRRGDEV TS  QGAR+P+K AHTD Y+DNS  RGGARTT AT  ++ATNNHD                                                        +GRE  G   AGVLAQENSSKAAE G      G DA+ GPVRA+E  NDISAEEDEYDADFASQAEDSLVEEVDEDA DAAPGP PFVAPK ID IHE+DE E EDA+WDQD      XXXXXXXXXX  EYGDDFDS
Sbjct:  185 SPLRSRTLSPGGDGXXXXXXXXXXXTLRRRRVGALEVQVAARHPNRGHLLHAQVIHSKLASGRWPRLGTSVCLPNRLRRALESWGFETDMREIDGRRKHENST-DGAGADTPSAQHPPRPRVRIPWEFDHRDRMRRGDEVTTSPHQGARIPEKNAHTDGYNDNSKSRGGARTTVATGKEVATNNHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRETEGTVAAGVLAQENSSKAAEAGV-----GRDAVGGPVRAEEGGNDISAEEDEYDADFASQAEDSLVEEVDEDADDAAPGPPPFVAPKAIDSIHEHDEEEFEDAVWDQDXXXXXXXXXXXXXXXXXXEYGDDFDS 558          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5461.15687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVB5_9PHAE5.150e-13541.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBW1_ECTSI3.750e-13065.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5461contigEcto-sp13_S_contig5461:5163..9154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5461.15687.1mRNA_Ecto-sp13_S_contig5461.15687.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5461 5163..9154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5461.15687.1 ID=prot_Ecto-sp13_S_contig5461.15687.1|Name=mRNA_Ecto-sp13_S_contig5461.15687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=376bp
SQLRFRSLSPGVDGGSSGSGSASATTLWRRRVGALEVQVAARHPNRGHLL
HAQVIHSKLASGRWPRLGTSMCLPNRLRRALESWGFETDRREVDGARKDE
NSTADGAGGGTPSAQHRPRPRVLIPWEFDHRDRMRRGDEVATSRRQGARV
PDKRAHTDDYHDNSMIRGGARTTPATANQIATNNHDFHGKGSNEPSTSGE
NGSETGNDGDRRRSGRSPERPGMPTTTLPDCKDDGCSPLRGREAHGKEVA
GVLAQENSSKAAEMGEDSLGEGGDALAGPVRAKERENDISAEEDEYDADF
ASQAEDSLVEEVDEDAADAAPGPSPFVAPKKIDGIHENDEGELEDAMWDQ
DAEEWEEEEKEEEVEEEEYGDDFDS*
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