prot_Ecto-sp13_S_contig5459.15683.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5459.15683.1
Unique Nameprot_Ecto-sp13_S_contig5459.15683.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length293
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5459.15683.1 vs. uniprot
Match: D7FWR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR2_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 1.480e-166
Identity = 268/294 (91.16%), Postives = 278/294 (94.56%), Query Frame = 0 
Query:    1 MDNLDGLESALWEAHGREARAAALFETRNLRRTHASERAALEADLQQRRERLDEACSRQVRTLLQAHNEQLTQVDPTAFATAVGDGGGSREDKVEFDEPPLVTTTDSVEVRPLEGAAAPEAGTRSSETIDIPAAILPTVAECLQEAGRQE-AQTEDGQKEQRFGHESLPGTRHEKLQLPFAGIGTAASAVATGVTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGRYLKEATRVMREIEKLEARDKANARGELGTISPEKATLLQKQAQAKEVQADKHHRLRRALESLG 293
            MDNLDGLESALWEAHGREARAA L ETRNLRRTHASERAALEADLQ+RRERL+EACSRQVRTLLQAHNEQLTQVDPTAFATAVGDGGGSREDKV+ DEPP +TTTDSVE+RPL GAAAPEAGTRSSETI IPAA LPTVAECLQEAGRQE AQT+DGQKEQRFGHESLP TRHEKLQLPFAG+G+AA  VAT VTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGRYLKEATRVMREIE+LEARDK NARG  GTIS EKATLLQKQAQAKEVQADKH+RLRRALESLG
Sbjct:    1 MDNLDGLESALWEAHGREARAAVLLETRNLRRTHASERAALEADLQRRRERLEEACSRQVRTLLQAHNEQLTQVDPTAFATAVGDGGGSREDKVKHDEPPPMTTTDSVEIRPLAGAAAPEAGTRSSETIGIPAATLPTVAECLQEAGRQEEAQTKDGQKEQRFGHESLPRTRHEKLQLPFAGMGSAAPVVATAVTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGRYLKEATRVMREIEELEARDKTNARGGFGTISLEKATLLQKQAQAKEVQADKHNRLRRALESLG 294
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BLAST of mRNA_Ecto-sp13_S_contig5459.15683.1 vs. uniprot
Match: A0A6H5JDU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU2_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 8.240e-136
Identity = 236/298 (79.19%), Postives = 242/298 (81.21%), Query Frame = 0 
Query:    1 MDNLDGLESALWEAHGREARAAALFETRNLRRTHASERAALEADLQQRRERLDEACSRQVRTLLQAHNEQLTQVDPTAFATAVGDGGGSREDKVEFDEPPLVTTTDSVEVRPLEGAAAPEAGTRSSETIDIPAAILPTVAECLQEAGRQ-EAQTEDGQKEQRFGHESLPGTRHEKLQLPFAGIGTAASAVATGVTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGRYLKEATRVMREIEKLEARDKA----NARGELGTISPEKATLLQKQAQAKEVQADKHHRLRRALESLG 293
            MDNLDGLESALWEAHGREARA AL ETRNLR                                  AHNEQLTQVDPTAF TAVGDGGGSREDKVE DEPP +TTTDSVE+RPL GAAAPEA TRSSETIDIP A LPTVAECLQEAGRQ EAQTEDGQK QRF HESLPGTRHEKLQLPFA + TAASAVAT VTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGR+LKEATRVMREI+KLEARDKA    NARG LGTI+ E ATLLQKQAQAKEVQADKHHRLRRALESLG
Sbjct:    1 MDNLDGLESALWEAHGREARAVALLETRNLR----------------------------------AHNEQLTQVDPTAFTTAVGDGGGSREDKVEHDEPPPMTTTDSVEIRPLAGAAAPEASTRSSETIDIPTATLPTVAECLQEAGRQGEAQTEDGQKGQRFRHESLPGTRHEKLQLPFAAMRTAASAVATAVTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGRHLKEATRVMREIDKLEARDKAEVGANARGGLGTINLETATLLQKQAQAKEVQADKHHRLRRALESLG 264
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5459.15683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWR2_ECTSI1.480e-16691.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDU2_9PHAE8.240e-13679.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58
NoneNo IPR availableCOILSCoilCoilcoord: 228..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5459contigEcto-sp13_S_contig5459:2..1679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5459.15683.1mRNA_Ecto-sp13_S_contig5459.15683.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5459 2..1679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5459.15683.1 ID=prot_Ecto-sp13_S_contig5459.15683.1|Name=mRNA_Ecto-sp13_S_contig5459.15683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MDNLDGLESALWEAHGREARAAALFETRNLRRTHASERAALEADLQQRRE
RLDEACSRQVRTLLQAHNEQLTQVDPTAFATAVGDGGGSREDKVEFDEPP
LVTTTDSVEVRPLEGAAAPEAGTRSSETIDIPAAILPTVAECLQEAGRQE
AQTEDGQKEQRFGHESLPGTRHEKLQLPFAGIGTAASAVATGVTGAVVVD
RTRSNRELVGLRSDLGRHLAAVAHVVDRGRYLKEATRVMREIEKLEARDK
ANARGELGTISPEKATLLQKQAQAKEVQADKHHRLRRALESLG
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