prot_Ecto-sp13_S_contig20071.6556.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig20071.6556.1
Unique Nameprot_Ecto-sp13_S_contig20071.6556.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length338
Homology
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BLAST of mRNA_Ecto-sp13_S_contig20071.6556.1 vs. uniprot
Match: D7FYB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB1_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 2.030e-168
Identity = 253/284 (89.08%), Postives = 263/284 (92.61%), Query Frame = 0 
Query:    1 MLSNFLRGGEMPTTPPNFRAARETEKNHPRNPLHEHQHRPTPGYAGSASPSSAAFSRTSPGTERGPSRQATPTQDGPAGGHGGMGGYKAGFDVTNSVDNSRRTLRMAKEAENQRYKSLFTNAPAELPEVTIMPVGGGDNNNPQVGGTNARDRSISTSRAASREDMRVKAGGGSDSIAGPNQLTNSRRARTAKVDYHNSVRRKSSNTSFTHPVGHPGRLDVLAPSQSRVESLKGWGEGQPIVVAAAGRGDSSGTRGLARPVSVAGGSAATTGPHEEPFRWIPGEA 284
            +LSNFLRGGEMP+T  +FRAARETEKNHPRNPLHEHQHRPTPGYAGSASPSS AFSRTSPGTERGP RQATPT DGPAGGHGGMGGYKAGFDVTNSV+NS  T RMAKEAENQRYKSLFTNAPAELPEVT+MP GGGDNNN QVGGTNARD SISTSRA SREDM+VKAGGGSD +AGPNQ TN RRA+TAKVDYHNSVRRKSSNTSFTH VGHPG LD LAPSQSRVESLKGWGEGQP+VVAAAGRGD SGTR LARPVSV GGSAATTGPHEEPFRWIPG+A
Sbjct:  209 LLSNFLRGGEMPSTALHFRAARETEKNHPRNPLHEHQHRPTPGYAGSASPSSPAFSRTSPGTERGPFRQATPTLDGPAGGHGGMGGYKAGFDVTNSVNNSGHTSRMAKEAENQRYKSLFTNAPAELPEVTVMPAGGGDNNNLQVGGTNARDLSISTSRADSREDMKVKAGGGSDGMAGPNQPTNYRRAQTAKVDYHNSVRRKSSNTSFTHQVGHPGGLDALAPSQSRVESLKGWGEGQPVVVAAAGRGDPSGTRELARPVSVVGGSAATTGPHEEPFRWIPGKA 492
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BLAST of mRNA_Ecto-sp13_S_contig20071.6556.1 vs. uniprot
Match: A0A6H5KRY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY7_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 6.540e-165
Identity = 248/291 (85.22%), Postives = 265/291 (91.07%), Query Frame = 0 
Query:    2 LSNFLRGGEMPTTPPNFRAARETEKNHPRNPLHEHQHRPTPGYAGSASPSSAAFSRTSPGTERGPSRQATPTQDGPAGGHGGMGGYKAGFDVTNSVDNSRRTLRMAKEAENQRYKSLFTNAPAELPEVTIMPVGGGDNNNPQVGGTNARDRSISTSRAASREDMRVKAGGGSDSIAGPNQLTNSRRARTAKVDYHNSVRRKSSNTSFTHPVGHPGRLDVLAPSQSRVESLKGWGEGQPIVVAAAGRGDSSGTRGLARPVSVAGGSAATTGPHEEPFRWIPGEAHKNKPPVA 292
            LSNFLRGGEMP+TP NFRAARETEKNHPR+PLHEHQHRPTPGYAGSASPSS AFSRTSPGTERGPSRQATPT DGPA GHGG+GGYK GFD TNSV NS RT +MAKEA++QRYKSLFTN+PAELPEVT+MP GGGDNNN QVGGTNARDRS+STSRAASREDM+VKAG GSD +AGPN  TN RRA+TAKVDYHNSVRRKSSNTSFTHPVGHPG LD LAPSQSRVESL+GWGEGQP+VVA AGRGDSSGTRGLARPVSV+G SAATTGPHEEPFRWIP +A    P +A
Sbjct:  248 LSNFLRGGEMPSTPLNFRAARETEKNHPRDPLHEHQHRPTPGYAGSASPSSTAFSRTSPGTERGPSRQATPTLDGPAAGHGGIGGYKVGFDGTNSVHNSGRTSQMAKEADHQRYKSLFTNSPAELPEVTVMPAGGGDNNNLQVGGTNARDRSMSTSRAASREDMKVKAGRGSDGMAGPNHPTNYRRAQTAKVDYHNSVRRKSSNTSFTHPVGHPGGLDALAPSQSRVESLRGWGEGQPVVVAVAGRGDSSGTRGLARPVSVSGRSAATTGPHEEPFRWIPEKAPPPTPRLA 538
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20071.6556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYB1_ECTSI2.030e-16889.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY7_9PHAE6.540e-16585.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20071contigEcto-sp13_S_contig20071:129..1330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20071.6556.1mRNA_Ecto-sp13_S_contig20071.6556.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig20071 115..1330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig20071.6556.1 ID=prot_Ecto-sp13_S_contig20071.6556.1|Name=mRNA_Ecto-sp13_S_contig20071.6556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp
MLSNFLRGGEMPTTPPNFRAARETEKNHPRNPLHEHQHRPTPGYAGSASP
SSAAFSRTSPGTERGPSRQATPTQDGPAGGHGGMGGYKAGFDVTNSVDNS
RRTLRMAKEAENQRYKSLFTNAPAELPEVTIMPVGGGDNNNPQVGGTNAR
DRSISTSRAASREDMRVKAGGGSDSIAGPNQLTNSRRARTAKVDYHNSVR
RKSSNTSFTHPVGHPGRLDVLAPSQSRVESLKGWGEGQPIVVAAAGRGDS
SGTRGLARPVSVAGGSAATTGPHEEPFRWIPGEAHKNKPPVAYSHSRKDS
PANPSARVPTSSSSAGETEASATRLPQPRRTANSGRSR
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