prot_Ecto-sp13_S_contig2007.6554.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2007.6554.1
Unique Nameprot_Ecto-sp13_S_contig2007.6554.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length388
Homology
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: D7FPV0_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV0_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 2.560e-236
Identity = 356/387 (91.99%), Postives = 362/387 (93.54%), Query Frame = 0
Query:    1 MSTSAVDATKTTQGNSSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQRVVAQHPTVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHDPNKQSVQIGTDGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNPFDTVLIPTQLVVDTCYTTFVKLEADKLGEAETKKTWKQRLAMVANNRGADEGEQEAFLVSKYDLLPESLADMVQILTMSNDEEVAYAAIAAVSQAKMGQYSPLLQDTKSNAGEWALGADARTLARMLVNEEKKVLQDLRLQLMSVILDDHEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSTKKRRKG 387
            MSTSAVDATKTTQG SSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQ VVAQHPTVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHDPNKQSVQIGTDGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGN FDTVLIPTQLVV+TCY TFVKLEADKLGEAETKKTW+QRLAMVA+NR ADEGEQEAF+VSKYDLLPESLADMVQILTMSNDEEVAYA IAAVSQAKMGQYSPLLQD K NAGE A+GADARTLARMLVNEEKKVLQDLRLQLMSVILDD+ED XXXXXXXXXXXXXXX               TKKRRKG
Sbjct:  107 MSTSAVDATKTTQGESSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQSVVAQHPTVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHDPNKQSVQIGTDGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNSFDTVLIPTQLVVNTCYATFVKLEADKLGEAETKKTWEQRLAMVASNRDADEGEQEAFVVSKYDLLPESLADMVQILTMSNDEEVAYATIAAVSQAKMGQYSPLLQDAKRNAGEGAIGADARTLARMLVNEEKKVLQDLRLQLMSVILDDNEDXXXXXXXXXXXXXXXXGSASGTSPDASEEKGTKKRRKG 493          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A0A836C8N7_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N7_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.420e-96
Identity = 162/330 (49.09%), Postives = 214/330 (64.85%), Query Frame = 0
Query:   23 RLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQRVVAQHPTVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHDPNKQSVQIGTDGEEH---FVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNPFDTVLIPTQLVVDTCYTTFVKLE--ADKLGEAE-------TKKTWKQRLAMVANNRGADEGEQEAFLVSKYDLLPESLADMVQILTMSNDEEVAYAAIAAVSQAKMGQYSPLLQDTKSNAGEWALGADARTLARMLVNEEKKVLQDLRLQLM 340
            +LT AC TVLRLLHE G G  + F +YLS+LP+DHR+PLEW   E  LLQGT+AEPLV +G+L+ Q+  F+ +V +HP +W   VC+ AAFAK VNWVRSRGFTV G+P+MIP ADMFNH+P+ QS   G   E+    FVM+ V+ +  G EVFSSFG I+NAQL+NSYGFVLP NPFD+VL+P +LV+D C   F  LE   ++ GE          ++ W++RL M+    G    E+E F+++KYD+LPE LA+ +Q L  + D  V Y A+ AV   K+  Y+P       +     + ADAR +   LV EE   L DL+ QLM
Sbjct:  117 KLTSACFTVLRLLHELGEGGKAHFSNYLSILPRDHRIPLEWNAEERALLQGTAAEPLVLSGNLEGQYSVFEELVKEHPGLWAKEVCSSAAFAKAVNWVRSRGFTVHGEPYMIPCADMFNHNPSDQSAMFGQASEDSADVFVMRAVKSIPKGSEVFSSFGQIANAQLVNSYGFVLPQNPFDSVLVPAKLVIDACRAAFANLERSGEEGGEXXXXXXXXXVERAWQKRLDMLRGG-GVLVSEEEQFVLTKYDMLPEPLAEAIQSLLFTEDPLVVYGALVAVIAEKLQSYAPAAAFEADS-----VRADARAVVEALVREETVFLTDLKAQLM 440          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A0A5J4YBZ4_9CHLO (SET domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBZ4_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 3.450e-22
Identity = 88/298 (29.53%), Postives = 139/298 (46.64%), Query Frame = 0
Query:   18 KPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQRVVAQHPT-VWEPSVCTKAAFAKGVNWVRSRGFTVMGDP------------HMIPGADMFNHD--PNKQSVQIGTDGEEH--------------FVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVL---PG--NPFDTVLIPTQLVVDTCYTTFVKLEADKLGEAETKKTW--KQRLAMVANNRGADEGEQEAFLVSKYDLLPESLADMVQILTMSNDE 279
            K   P ++    TVL LL+E G G  S F ++L  LPQ+H   L W++ ++  LQGT+ E  +   S  + FE     + Q  T +W   V T  AF      V+SR F ++ +             +M+P  DM NH   P+K++  +     EH              F MK  + +  GE++  ++G +S+AQLL +YGFV    PG  NP + V +PT L++ +C          + G+      +  K++L   AN        ++AF+V+  + LP+ L   VQ+L M   E
Sbjct:   77 KEKHPGISPFLATVLLLLYEMGQGSKSKFSAFLQTLPQEHDCVLCWSKGQLSELQGTAIE--IAGDSTRTVFEREVLPIMQQATDIWSAEVQTYEAFELYAGLVQSRAFHMLQENWITGSAQEGVELYMLPAIDMINHSTQPDKRNTLLRKSNAEHTVKVDGEAMTIQGFFTMKAERDIAKGEQLLHTYGDLSDAQLLQTYGFVEDFEPGYDNPHNFVPVPTVLLLQSC---------SEAGDEAALACFEGKRKLLQQANIL------KDAFVVTSQEPLPDDLVTAVQVLHMEPHE 357          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A0A8J9WNZ3_9CHLO (Probable N-lysine methyltransferase setd6 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNZ3_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 1.200e-15
Identity = 60/189 (31.75%), Postives = 91/189 (48.15%), Query Frame = 0
Query:   35 LHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQR-VVAQHPTVWEPSVCTKAAFAKGVNWVRSRGF-----------TVMG-DPHMIPGADMFNHD--PNKQSVQI-------------GTDGEEH---FVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFV 192
            +H R  GE S ++SYL  LP  H   L WT+ EV  L GTS     G      +++   R ++ Q P +W PS C+   F      V+SR F           +V G D  ++PG DM NH   P +++ ++             G+  E +   F M   + V AGE++  ++G +++AQLL +YGFV
Sbjct:    1 MHHRAKGEQSKYNSYLITLPAHHNCTLGWTDEEVKQLAGTSIAD-TGLTKTALEYDGLVRPILEQRPDLWPPSSCSFEEFVYAAGMVQSRAFHVETENWVTGESVEGKDLFLVPGMDMINHSCHPRERNTKLVLSYDSVTFQREPGSPQESYTGYFAMLAGRDVAAGEQILHTYGDLTDAQLLQTYGFV 188          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A0A2V0PCR2_9CHLO (SET domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PCR2_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 5.840e-15
Identity = 73/229 (31.88%), Postives = 104/229 (45.41%), Query Frame = 0
Query:   15 NSSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQRVVAQHPTVWEPS-------------VCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHD---------------PNKQSVQ-IGT-DGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFV--LPG-NPFDTVLIPTQLVVD 210
            +S+ P A    R   TVL L+ E   GE+SP+  Y++ LP      L W  ++  LL GTS E   G  +          ++A  P +W P+             V T+A   K  NWV       +   ++IP  DM NH                P    V+ +GT   +  F MK  + + AGEEV  ++G +S+AQLL +YGF+  LPG NP D  L+P  L+ D
Sbjct:   86 SSAHPGASPFMR---TVLLLMAELARGEASPWAPYIASLPASTDCLLTWPASDRALLAGTSLEDK-GRDAQSVFASDIAPMLAARPDLWPPAKAGYAEFQRAAEMVQTRAFHMKEENWVTGAVTEAVEQLYLIPAMDMLNHSTLPELRNTTLERISAPLTVEVEGVGTLSFDSFFTMKAERAIAAGEEVLHTYGDLSDAQLLQTYGFLESLPGPNPNDFALLPFSLLSD 310          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A0A7S4DKW8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKW8_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 1.150e-14
Identity = 69/216 (31.94%), Postives = 102/216 (47.22%), Query Frame = 0
Query:  139 MFNHDPNKQSVQI--------GTDGE-EHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNPFDTVLIPTQLVVDTCYTT------FVKLEADKLGEAETKKTWKQRLAMVANNRGADEGEQEAFLVSKYDLLPESLADMVQILTMSNDEEVAYAAIAAVSQAKMGQYSPLLQDTKSNAGEWALGADARTLARMLVNEEKKVLQDLRLQL 339
            M NHDP++              +DG  E F +   +P+ A EE+F SFG +SNA LL SYGF+L  N FD V+IP  +V + C          V    D     E+  T   ++  +AN +   +G    +++SKY+ + E L   VQ    + D E  Y  +  V  AK   Y+   ++T   A   ++G DA  +   LV +EK VL   R Q+
Sbjct:    1 MLNHDPHRAGATFLQEEEGNGDSDGTGEVFKLVATRPLVANEEIFRSFGPLSNAMLLESYGFILEDNVFDRVIIPRHMV-EHCLKQQEQTKQLVGKTTDSQSVDESDST--TQVFHMANKKNTGQG----YILSKYNPVSEDLVADVQHHLDTVDLERVYQVVWNVLGAKEASYAKANKETNCCA---SVGTDALQIVHWLVQQEKSVLHRARQQI 206          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A0A139IC11_9PEZI (Ribosomal lysine N-methyltransferase 4 n=1 Tax=Pseudocercospora musae TaxID=113226 RepID=A0A139IC11_9PEZI)

HSP 1 Score: 85.1 bits (209), Expect = 2.150e-14
Identity = 91/348 (26.15%), Postives = 155/348 (44.54%), Query Frame = 0
Query:   31 VLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQF-EAFQRVVAQHPTVWEP---------SVC-----TKAAFAKGVNWVRSRGFTVMGDPH------------MIPGADMFNHDPNKQSVQIGTDGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNP-FDTVLIPTQLVVDTCYTTFVKLEADKLGEAETKKTWKQRLAMVANNRGA-DEGEQEAFLVSKYDLLPESLADMVQILTMSNDE-------------EVAYAAIAAVSQAKMGQYS--PLLQDTKSNAGEWALGADARTLARMLVNEEKKVLQD 334
            +L +++E   G  SPF  Y  +LP++    + WT+AE+  LQG++    +G    D++F E    ++AQH  +++          ++C     T  A+A  +    S   T   +              MIP ADM N D +  + ++  + ++  VMKT++ ++AGEE+F+ FG +  A LL  YG+V      +D V IP+ L+           E  K+ E +    W+      A  +G  D+    A   S+    PE L  ++ +L +   E             E++  A   +  A + +YS  P  +DT S      LG     +AR +V  EK+VL++
Sbjct:   91 ILAMVYEYLRGPESPFQPYFDILPENFDTLMFWTDAELQHLQGSAVIEKIGKEGADTKFSEQLIPIIAQHTDIFKTGSRSNQDLLALCHRMGSTIMAYAFDLEKPTSEQSTENVEEWEDDQEEEILPKGMIPLADMLNADADLNNAKLFYE-DDKVVMKTIEKIRAGEELFNDFGPLPRADLLRRYGYVTSNYAKYDVVEIPSDLIKGCAK------ELLKVDENDLYPKWQ-----YAEEQGILDDAYDIAKAGSEEGQFPEELCVLLNLLVLHKTEVEKMAKKDKLPKAELSNEAKKLLRSALVHRYSEYPAERDT-SGLASGRLG-----MARQVVEGEKEVLKE 420          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A8ITX6_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8ITX6_CHLRE)

HSP 1 Score: 83.6 bits (205), Expect = 1.120e-13
Identity = 62/214 (28.97%), Postives = 98/214 (45.79%), Query Frame = 0
Query:   21 APRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLV--GAGSLDSQFEA-FQRVVAQHP-------TVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPH---MIPGADMFNHDPNKQSVQIGTDGEEHFVMK-----------TVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNPFDTVLIPTQLVVD 210
            A RL      V  +++E   G +S +H YL  LP    LP+ W+  ++  L GT           S+ + F      +++++P         W     +  AF    +WV SR F V  D H   ++P AD+FNH   +  +  G+     FV+              QP+  G EV++++G  SNA+L+N YGF LP N FD +L+    V++
Sbjct:   84 AERLGGGLALVAAVMYEAARGPASKWHGYLRSLPAREYLPVFWSARQLQQLAGTDLADKAEEDRASMAADFSTHLAPLLSRYPGRLGHLAAGW-----SLEAFMHAASWVASRAFYV-DDTHGDALVPLADVFNHKAARVDLGEGSGWSAGFVVAEQEGVELLDIVAAQPLAGGTEVYNTYGEHSNAELVNKYGFALPYNAFDEILLDKGAVLE 291          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: UPI0011D21973 (N-lysine methyltransferase setd6 isoform X1 n=2 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D21973)

HSP 1 Score: 81.3 bits (199), Expect = 5.030e-13
Identity = 72/257 (28.02%), Postives = 107/257 (41.63%), Query Frame = 0
Query:   12 TQGNSSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEV-GLLQGTSAEPLVGAGSL---DSQFEAFQRVVAQHPTVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPH---MIPGADMFNHDPNKQSVQ------------------------IGTDGEEHFV---------------------------MKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNPFDTVLIPTQLVVD 210
            T G SS   A  L  +    + L++ER LG SSP+  YL +LP++  LP+ WT  EV GLL+GT     V        D   E+   ++   P   +P       +    + V SR F +  + H   M+P AD+FNH    + V                         I  DG    +                           M  ++ VKAG+EV++++G + NA LL+ YGF    NP+D V I  +LV++
Sbjct:   93 TGGASSLVEAAGLEGSLGLSVALMYERSLGASSPWAGYLQLLPEEECLPMVWTLDEVDGLLRGTELHKTVREDKALIYDDWKESILPLLDSGPLKLKPEFFGPEQYFAARSLVASRSFEI-DEYHGSGMVPLADLFNHKTGAEDVHFTNVSSHGESDDDSDYGDDYPDADITEDGNGQLIQDLDTNSHGNMDMECPPVSKEDPAVLEMILLKDVKAGDEVYNTYGTLGNAALLHRYGFTEENNPYDIVNIDIELVLE 348          
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Match: A0A7R9VAF8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VAF8_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 8.000e-13
Identity = 64/233 (27.47%), Postives = 101/233 (43.35%), Query Frame = 0
Query:   20 PAPRLTRACLT-----------VLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQRVVAQHPTVWEPSVC----------TKAA-----------FAKGVNWVRSRGFTVMG------------DPHMIPGADMFNH--DPNKQS---------VQIGTDG-----EEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFV 192
            PAPR  R  +T           VL ++ E   G  SPF  YL+ LP D    L W++AE   L+GT+ +      + ++        VA  P +W P+            TK A           F +  + V+SR F +              +  +IP  DM NH  DP +++         +++  DG     +  F MK  + ++AGE+V  ++G +S+AQL+ +YGFV
Sbjct:   90 PAPRAARHLVTSSPRPSPFLGSVLMVMSELAAGRDSPFSDYLAALPDDVNCVLGWSQAEKDELKGTTIDDSTQRSAGEAYASEVAPRVAARPDLWPPAAAASAERAAPAGTKTAGGSGGLDGLREFLRVASLVQSRAFHMEAQNWITGVREEGTELFLIPAIDMINHSTDPARRNTSLHKFDVRMEVEVDGRNVVFDAFFAMKADRDIRAGEQVLHTYGDLSDAQLVQTYGFV 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2007.6554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPV0_ECTSI2.560e-23691.99SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836C8N7_9STRA1.420e-9649.09SET domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A5J4YBZ4_9CHLO3.450e-2229.53SET domain-containing protein n=1 Tax=Trebouxia sp... [more]
A0A8J9WNZ3_9CHLO1.200e-1531.75Probable N-lysine methyltransferase setd6 at N-ter... [more]
A0A2V0PCR2_9CHLO5.840e-1531.88SET domain-containing protein n=1 Tax=Raphidocelis... [more]
A0A7S4DKW8_HETAK1.150e-1431.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A139IC11_9PEZI2.150e-1426.15Ribosomal lysine N-methyltransferase 4 n=1 Tax=Pse... [more]
A8ITX6_CHLRE1.120e-1328.97Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]
UPI0011D219735.030e-1328.02N-lysine methyltransferase setd6 isoform X1 n=2 Ta... [more]
A0A7R9VAF8_9CHLO8.000e-1327.47Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001214SET domainPFAMPF00856SETcoord: 119..177
e-value: 5.1E-5
score: 23.7
IPR001214SET domainPROSITEPS50280SETcoord: 68..178
score: 9.31
NoneNo IPR availableGENE3D3.90.1410.10coord: 2..192
e-value: 2.9E-33
score: 117.3
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 14..327
NoneNo IPR availablePANTHERPTHR13271:SF34N-LYSINE METHYLTRANSFERASE SETD6coord: 14..327
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 24..196
IPR036464Rubisco LSMT, substrate-binding domain superfamilySUPERFAMILY81822RuBisCo LSMT C-terminal, substrate-binding domaincoord: 188..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2007contigEcto-sp13_S_contig2007:422..3950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2007.6554.1mRNA_Ecto-sp13_S_contig2007.6554.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2007 293..4145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2007.6554.1 ID=prot_Ecto-sp13_S_contig2007.6554.1|Name=mRNA_Ecto-sp13_S_contig2007.6554.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
MSTSAVDATKTTQGNSSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYL
SVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQRVVAQHP
TVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHDPNKQSVQ
IGTDGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNPFDT
VLIPTQLVVDTCYTTFVKLEADKLGEAETKKTWKQRLAMVANNRGADEGE
QEAFLVSKYDLLPESLADMVQILTMSNDEEVAYAAIAAVSQAKMGQYSPL
LQDTKSNAGEWALGADARTLARMLVNEEKKVLQDLRLQLMSVILDDHEDE
DKDEDEGNNDGGGRGGSASGTSPDTSEENSTKKRRKG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom
IPR036464Rubisco_LSMT_subst-bd_sf