prot_Ecto-sp13_S_contig20064.6552.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig20064.6552.1
Unique Nameprot_Ecto-sp13_S_contig20064.6552.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
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BLAST of mRNA_Ecto-sp13_S_contig20064.6552.1 vs. uniprot
Match: D7G124_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G124_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.600e-16
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0 
Query:    1 ILESDASLRPSYEDFMERLKEAKNAVTRKKLQLAKPMKRPSERKR 45
            ILESDASLRPSYEDFM+RLKEAKNAVTRKKLQLAKPMKRPSERKR
Sbjct:  354 ILESDASLRPSYEDFMKRLKEAKNAVTRKKLQLAKPMKRPSERKR 398
[Close]
BLAST of mRNA_Ecto-sp13_S_contig20064.6552.1 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 2.690e-6
Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0 
Query:   12 YEDF---MERLKEAKNAVTRKKLQLAKPMKRPSERKR 45
            Y+D+   ++RLKEAKNAVTRKKLQLAKPMKRPSERKR
Sbjct:  130 YQDWSQELKRLKEAKNAVTRKKLQLAKPMKRPSERKR 166
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20064.6552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G124_ECTSI1.600e-1697.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJG8_ECTSI2.690e-681.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20064contigEcto-sp13_S_contig20064:343..652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20064.6552.1mRNA_Ecto-sp13_S_contig20064.6552.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig20064 343..652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig20064.6552.1 ID=prot_Ecto-sp13_S_contig20064.6552.1|Name=mRNA_Ecto-sp13_S_contig20064.6552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
ILESDASLRPSYEDFMERLKEAKNAVTRKKLQLAKPMKRPSERKRKGKSW
GGAGRGRSRGAKGRKRTARKSKTQGGGEEDEDEEEE
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