prot_Ecto-sp13_S_contig20056.6549.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig20056.6549.1
Unique Nameprot_Ecto-sp13_S_contig20056.6549.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length196
Homology
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BLAST of mRNA_Ecto-sp13_S_contig20056.6549.1 vs. uniprot
Match: A0A7S3M7S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7S9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 6.350e-6
Identity = 27/87 (31.03%), Postives = 52/87 (59.77%), Query Frame = 0 
Query:   21 TLVVRAIDGEWVMGEDLVLPVTGDETIVEIQQVVKGMKGVPLTRMVAFKEESESRISDKHMTWSLSRNGLYTGAVLVLRPSRPNQWL 107
            ++ +R +D +WVMGED V+ +    T+VEI+Q V+  +G+   R +  + + +   +++ + W+L R G+Y G V+ + P+    WL
Sbjct:   22 SVTLRPVDKDWVMGEDWVVDLHNQTTMVEIRQYVETHRGISKHR-IQLRMKGKVCPTNREI-WTLRRLGIYDGYVIQVEPTLSGAWL 106
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20056.6549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3M7S9_9STRA6.350e-631.03Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20056contigEcto-sp13_S_contig20056:168..1778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20056.6549.1mRNA_Ecto-sp13_S_contig20056.6549.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig20056 168..1975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig20056.6549.1 ID=prot_Ecto-sp13_S_contig20056.6549.1|Name=mRNA_Ecto-sp13_S_contig20056.6549.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
MKRPDPTGDDGDDDEEEEVRTLVVRAIDGEWVMGEDLVLPVTGDETIVEI
QQVVKGMKGVPLTRMVAFKEESESRISDKHMTWSLSRNGLYTGAVLVLRP
SRPNQWLWHPLAWYEERLLKAAEDVASSSPWAEMGTGCPLSILEKEVLVP
PPLRRDSLKGILRRFPDRLRLQLDVVSQKFVAFPNKEEMLLPSSY*
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