prot_Ecto-sp13_S_contig20052.6547.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig20052.6547.1
Unique Nameprot_Ecto-sp13_S_contig20052.6547.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length127
Homology
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BLAST of mRNA_Ecto-sp13_S_contig20052.6547.1 vs. uniprot
Match: D7FP24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP24_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 1.380e-70
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0 
Query:   16 MEACSDDGSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLAQTERALQLLSTDPRCRTLNDFCSSDGAPPTVLGEWLPNG 126
            MEA SD GSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTL QTERAL+LLS DPRCRTLNDFCSSDGAPPTVLGEWLPNG
Sbjct:    1 MEARSDGGSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLDQTERALELLSADPRCRTLNDFCSSDGAPPTVLGEWLPNG 111
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BLAST of mRNA_Ecto-sp13_S_contig20052.6547.1 vs. uniprot
Match: A0A6H5K5Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y4_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.660e-43
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0 
Query:   16 MEACSDDGSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLAQ 88
            MEA SD GSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLAQ
Sbjct:    1 MEARSDGGSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLAQ 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20052.6547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP24_ECTSI1.380e-7095.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5Y4_9PHAE3.660e-4397.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20052contigEcto-sp13_S_contig20052:460..3168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20052.6547.1mRNA_Ecto-sp13_S_contig20052.6547.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig20052 460..3168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig20052.6547.1 ID=prot_Ecto-sp13_S_contig20052.6547.1|Name=mRNA_Ecto-sp13_S_contig20052.6547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp
IVFDGTPAPRLLPRNMEACSDDGSGGGIGFAGSSSSSRFISQIFWPEHCL
NLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLAQTERALQLLSTDP
RCRTLNDFCSSDGAPPTVLGEWLPNG*
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