prot_Ecto-sp13_S_contig2005.6544.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2005.6544.1
Unique Nameprot_Ecto-sp13_S_contig2005.6544.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1127
Homology
BLAST of mRNA_Ecto-sp13_S_contig2005.6544.1 vs. uniprot
Match: D7FT98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT98_ECTSI)

HSP 1 Score: 1732 bits (4487), Expect = 0.000e+0
Identity = 979/1122 (87.25%), Postives = 1006/1122 (89.66%), Query Frame = 0
Query:   31 VPKVLSDVLDKIKTSTSPTASKGPTQESEDVDTGNAAGKGSATPYQLPTLLDIARVVLTPSGAGGYRAGTTPPKARSRALALDCVSLGLVLHLVPSEEDRLKCFRREALAVAAVGAKDERWEVRVAAARTAGEVLKRTGGQEKLIHLLSSEQGCWLPALLADGYPEVQHAARAALTQGLACPDGSGNGMPENGLNPAAGSLPSSPSAAAAPVGAXXXXXXXXXXXXXMRGACEALRAAALSNF---------ADLRAVDLAEEETTRTALRALRGGASLLGSTPGERESHSHLPPLASSXXXXXXXXXXXGNMQEATAARVEALETVEALLVGTLPDFPDLSVPWAAEGGDQHRAAASAGSAAGVGGLSLEAGETVRALSLGGAEGAAGFRAKALEAATAAVEEFRSECLSAAGGDGGREAGGEEGEGLWKRVYCGLLVRLEACSAFMAGPEPPSPPTAVSLPAREGVVVDRRDGHDTSAAAPPAQAPVAGEGAVGSSVGGESTTAPAARGSPPSSLARLTEGLAEALEEIPLAYVQAVPPNLDSNDDMTISEKNALRARGGRRRRWMVASTHLLLRAGAKLCEHYRRSCVGGAPATAVAGGSGSGGEEALASATLVKLLADDPTEAWLSCMGPPEDTPGLDLAGATAPSAASELTAPIPWESCVHGRALPRHALSAPWASHADTVELAKRLVDVAWSALYLGGDDAGGSGPAAAAEMLMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAETPPAELRWHRGILLEVLERGIRCGGRDSSASALCMAAMVRLLRRSPKXXXXXXXXX----ERAGIRIARETLAQAARATDGTVKAVMVCGAAALLEVPATGEGYAPCEFLRPALLCLLPILQSPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSLIWTCGDCARRASVRRLSSSSP-----------QQPSLGEVLAANAAAIDPSTDEAVQTYATRLGALVLVLAGDGNGGGAS--AARSTLREICAAVSVLRPHGAAMEQLADGAFSSEEGAGREGAAAVDGEERCKEVNSPAGDGGCGDSEVEKRLSSEANSAAKLVS 1126
            VPK LSD+LDKIKTSTSPTASKGPTQ+ EDVDTGNAAGKGSATPYQLP LLDIAR+ LTPS AGG R GTTPPKARSRALALDC+SLGLVLHL PSE DRLK FRREALAVAAVGAKDERWEVRVAAAR AGEVL+RTGGQEKL+HLLSS+QGCWLPALLADGYPEVQHAAR ALTQ LACPDGS +GMPENGLNPAA SLPSSPSAAAAPV A  XXXXXXXXXX MRGACEALRAAALSN           DLRAVDLAEEETTRTALRALRGGASLLGS PGERESHSHLP LASS           GN QEATAARVEALE+VEALLVGTLPDFPDLSVPWAAEGGDQH AAASA SAAGVGGLSLEAGETV ALSLGGAEGAAGFRAKALEAATAAVEEFRSECLSAA GDGG E GG+ GEGLWKRVYCGLLVRLE CSAFM GPEPPSPPTAVSLPAREGVVV+ RDGHDTSAA PP QA +AGEGA GS+VGGESTTAPAARGSPPSSLARLTE  AEALEE+PLAY QAVPPNLD+NDDMTISEKNALRARGGRRRRWMVASTHLLLRAGAKLCE YRRSC GGAPA  VAGGSGSGGE+ALASATLVKLLADDP EAWLSCM  PEDTPGLD AGATAPS+ASELTAPIPWESCVHG+ALPRH LSAPWASHA TVELAKRLVD+AWSALYLGGDDAGGSGP AAAE LMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAE PPAEL  HRG+LLEVLERGIRCGGRD SASALCMAA+VRLLRRS  XXXXXXXXX    ERAGIRIARETLAQAARATDG VKAVMVCGAAALLEVPATG+GYAPCEFLRPALLCLLPILQSPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSL+WTCGDC RRASVRRLSSSSP            QPSLG VLAANAAAIDP TDEAV+TYATRLGALVLVLAGD         AARSTLREICAAVSVLRPHGAAME+LADG FS EEGAGREGAAAVDGEE   E  SPAGDGGCG+SE+EKRLSSE NSAAKLVS
Sbjct:   45 VPKALSDLLDKIKTSTSPTASKGPTQDGEDVDTGNAAGKGSATPYQLPALLDIARLALTPSCAGGVRVGTTPPKARSRALALDCLSLGLVLHLEPSEGDRLKDFRREALAVAAVGAKDERWEVRVAAARAAGEVLRRTGGQEKLVHLLSSKQGCWLPALLADGYPEVQHAAREALTQSLACPDGSCDGMPENGLNPAAVSLPSSPSAAAAPVRAASXXXXXXXXXXAMRGACEALRAAALSNLDVEPEAGGVVDLRAVDLAEEETTRTALRALRGGASLLGSPPGERESHSHLPLLASSSALPGRREEEHGNEQEATAARVEALESVEALLVGTLPDFPDLSVPWAAEGGDQHGAAASARSAAGVGGLSLEAGETVCALSLGGAEGAAGFRAKALEAATAAVEEFRSECLSAAAGDGGGETGGKGGEGLWKRVYCGLLVRLEGCSAFMVGPEPPSPPTAVSLPAREGVVVNGRDGHDTSAATPPTQALIAGEGAGGSTVGGESTTAPAARGSPPSSLARLTEAFAEALEEVPLAYEQAVPPNLDNNDDMTISEKNALRARGGRRRRWMVASTHLLLRAGAKLCEQYRRSCGGGAPAADVAGGSGSGGEQALASATLVKLLADDPNEAWLSCMRSPEDTPGLDPAGATAPSSASELTAPIPWESCVHGQALPRHYLSAPWASHATTVELAKRLVDIAWSALYLGGDDAGGSGPTAAAETLMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAEAPPAELGLHRGLLLEVLERGIRCGGRDPSASALCMAAVVRLLRRSXXXXXXXXXXXXXXXERAGIRIARETLAQAARATDGAVKAVMVCGAAALLEVPATGKGYAPCEFLRPALLCLLPILQSPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSLLWTCGDCTRRASVRRLSSSSPGGGRAKDGPARPQPSLGVVLAANAAAIDPLTDEAVRTYATRLGALVLVLAGDXXXXXXXXXAARSTLREICAAVSVLRPHGAAMERLADGGFSLEEGAGREGAAAVDGEEGRMEGKSPAGDGGCGNSEMEKRLSSETNSAAKLVS 1166          
BLAST of mRNA_Ecto-sp13_S_contig2005.6544.1 vs. uniprot
Match: A0A6H5JC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC44_9PHAE)

HSP 1 Score: 1687 bits (4370), Expect = 0.000e+0
Identity = 963/1163 (82.80%), Postives = 988/1163 (84.95%), Query Frame = 0
Query:   31 VPKVLSDVLDKIKTSTSPTASKGPTQESEDVDTGNAAGKGSATPYQLPTLLDIARVVLTPSGAGGYRAGTTPPKARSRALALDCVSLGLVLHLVPSEEDRLKCFRREALAVAAVGAKDERWEVRVAAARTAGEVLKRTGGQEKLIHLLSSEQGCWLPALLADGYPEVQHAARAALTQGLACPDGSGNGMPENGLNPAAGSLPSSPSAAAAPVGAXXXXXXXXXXXXX---MRGACEALRAAALSN---------FADLRAVDLAEEETTRTALRALRGGASLLGSTPGERESHSHLPPLASSXXXXXXXXXXXGNMQEATAARVEALETVEALLVGTLPDFPDLSVPWAAEGGDQHRAAASAGSAAGVGGLSLEAGETVRALSLGGAEGAAGFRAKALEAATAAVEEFRSECLSAAGGDGGREAGGEEGEGLWKRVYCGLLVRLEACSAFMAGPEPPSPPTAVSLPAREGVVVDRRDGHDTSAAAPPAQAPVAGEGAVGSSVGGESTTAPAARGSPPSSLARLTEGLAEALEEIPLAYVQAVPPNLDSNDDMTISEKNALRARGGRRRRWMVASTHLLLRAGAKLCEHYRRSCVGGAPATAVAGGSGSGGEEALASATLVKLL------------ADDPTEAWLSCMGPPEDTPGLDLAGATAPSAASELTAPIPWESCVHGRALPRHALSAPWASHADTVELAKRLVDVAWSALYLGGDDAGGSGPAAAAEMLMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAETPPAELRWHRGILLEVLERGIRCGGRDSSASALCMAAMVRLLRRSPKXXXXXXXXXERAGIRIARETLAQAARATDGTVKAVMVCGAAALLEVPATGEGYAPCEFLRPALLCLLPILQ-----------------------------SPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSLIWTCGDCARRASVRRLSSSSPQ------------QPSLGEVLAANAAAIDPSTDEAVQTYATRLGALVLVLAGDGNGGGAS--AARSTLREICAAVSVLRPHGAAMEQLADGAFSSEEGAGREGAAAVDGEERCKEVNSPAGDGGCGDSEVEKRLSSEANSAAKLVS 1126
            VPK LSD+LDKIKTST+P  SKGPTQ+ EDVDTG+AAGKGSATPYQLP LL+IAR+VLTPSGAGG RAGTTPPKARSRALALDC+SLGLVLHL  SEED +K FRREALAVAAVGAKDERWEVRVAAARTAGEVL+RTG QEKLIHLLSSEQGCWLPALLADGYPEVQHAARAALTQ LAC DGSG+GMPENGLNPAAGSL SSPSAAAAPVGA           XX   MRGACEALRA ALSN          ADLRAVDLAEEETTRTALRALRGGASLLGS PGERESHSHLPPLAS            GN QEATAARVEALE+VEALLV TLP+FP LSVPWAAEGGDQH AAASAGSAAGVGGLSLEAGETVRALSLGG EG AGFRAKALEAATAAVEEFRSECLSA GGDGGREAGGE GEGLWKRVYCGLLVRLEACSAFM GPEPPS PTAVSLPAREGVVV+R+DGHDT AAAPPAQ P+AGEGA GSSVGGESTTAPAARGSPPSSLARL EGLAEALEE+PLAY QAVPPNLD NDDMTISEKNALR+ GGRRRRWM ASTHLLLRAGA LCE YRRS  G               EEALAS TLVKLL            ADDPTEAWLSCM PPEDTPGLD AGATAPSAASELTAPIPWESCVHGRALPRHALSAPWASHA+TVELAKRLVDVAWSALYLGGDDAGGSGP AAAE LMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAE PPAEL WHRG+LLEVLERGIRCGGRD SASALCM A VRLLR SPK  XXXXXXXERAGIRIARETLAQAARATDGTVKAVMVCGAAALLEVPATGEGYAPCEFLRPALLCLLPILQ                             SPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSL+WTCGDCARRASVR LS+SS              QPSLG  LAANAAAIDPSTDEAV+TYATRLGALVLVLAGD         AARSTLREICAAVSVLRPHGAAME+LADGAFS E GAGREGA A+DGEERC+E NSPAGDGGCGDSEVEKR SSEANSAA LVS
Sbjct:   35 VPKALSDLLDKIKTSTNPITSKGPTQDGEDVDTGDAAGKGSATPYQLPALLNIARLVLTPSGAGGVRAGTTPPKARSRALALDCLSLGLVLHLALSEED-MKYFRREALAVAAVGAKDERWEVRVAAARTAGEVLRRTGAQEKLIHLLSSEQGCWLPALLADGYPEVQHAARAALTQSLACLDGSGDGMPENGLNPAAGSLSSSPSAAAAPVGATSSFPATAAAAXXXXXMRGACEALRAVALSNSAVEPEAGGVADLRAVDLAEEETTRTALRALRGGASLLGSPPGERESHSHLPPLASPSAPPGPREEEEGNKQEATAARVEALESVEALLVATLPEFPYLSVPWAAEGGDQHGAAASAGSAAGVGGLSLEAGETVRALSLGGTEGPAGFRAKALEAATAAVEEFRSECLSA-GGDGGREAGGEGGEGLWKRVYCGLLVRLEACSAFMVGPEPPSRPTAVSLPAREGVVVERQDGHDTPAAAPPAQTPIAGEGAGGSSVGGESTTAPAARGSPPSSLARLAEGLAEALEEVPLAYEQAVPPNLDINDDMTISEKNALRSWGGRRRRWMAASTHLLLRAGANLCEQYRRSSCGXXXXXXXXXXXXXXXEEALASVTLVKLLVAALPFEQAATEADDPTEAWLSCMRPPEDTPGLDPAGATAPSAASELTAPIPWESCVHGRALPRHALSAPWASHANTVELAKRLVDVAWSALYLGGDDAGGSGPTAAAETLMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAEAPPAELGWHRGLLLEVLERGIRCGGRDPSASALCMTAAVRLLRCSPKNGXXXXXXXERAGIRIARETLAQAARATDGTVKAVMVCGAAALLEVPATGEGYAPCEFLRPALLCLLPILQVRADAAAFYSSTRAHDPPSHHPIPTPSRKSPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSLLWTCGDCARRASVRTLSTSSSPGGGRANDRPKRPQPSLGVALAANAAAIDPSTDEAVRTYATRLGALVLVLAGDXXXXXXXXXAARSTLREICAAVSVLRPHGAAMERLADGAFSWE-GAGREGATAIDGEERCRERNSPAGDGGCGDSEVEKRRSSEANSAANLVS 1194          
BLAST of mRNA_Ecto-sp13_S_contig2005.6544.1 vs. uniprot
Match: A0A836CB22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB22_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.970e-11
Identity = 63/210 (30.00%), Postives = 96/210 (45.71%), Query Frame = 0
Query:  780 GAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAETPPAELRWHRGILLEVLERGIRCGGRDSSASALCMAAMVRLLRRSPKXXXXXXXXXERAGIRIARETLAQAARATDGTVKAVMVCGAAALLEVPATGEG-------YAPCEFLRPALLCLLPILQSPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSLIWTCGDCAR 982
            G A+GH +PL LPLA  +    +A+G  LLL L A   P E+ WHR ++ E     ++    D++  +L +    RL++ +P          E   +  A   LA + R     ++   V GAAA++    T  G        A    LR  L  LLP++           + A+L  ++ L + CWPRV AH ++LLC L+      AR
Sbjct:  678 GEAMGHLVPLLLPLARHWKVERRALGLDLLLLLAARGTPTEVNWHRALINEAALEAVKTAD-DAAVISLALVLGARLVQCAPAT--------EAGAVAAALVRLAASMRGA--ALRLACVGGAAAVMHALRTSRGGDSPATAAALTLRLRALLAGLLPLIGPAMAPGGPPVQLAALSTLQRLLIHCWPRVRAHRARLLCCLVGARAFAAR 876          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2005.6544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT98_ECTSI0.000e+087.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC44_9PHAE0.000e+082.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CB22_9STRA5.970e-1130.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 327..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2005contigEcto-sp13_S_contig2005:5647..10437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2005.6544.1mRNA_Ecto-sp13_S_contig2005.6544.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2005 5501..10664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2005.6544.1 ID=prot_Ecto-sp13_S_contig2005.6544.1|Name=mRNA_Ecto-sp13_S_contig2005.6544.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1127bp
MSGRQLQYEKLSRLLQQLGDTWVAEWSAAEVPKVLSDVLDKIKTSTSPTA
SKGPTQESEDVDTGNAAGKGSATPYQLPTLLDIARVVLTPSGAGGYRAGT
TPPKARSRALALDCVSLGLVLHLVPSEEDRLKCFRREALAVAAVGAKDER
WEVRVAAARTAGEVLKRTGGQEKLIHLLSSEQGCWLPALLADGYPEVQHA
ARAALTQGLACPDGSGNGMPENGLNPAAGSLPSSPSAAAAPVGAASSSPA
TAAAAAAMRGACEALRAAALSNFADLRAVDLAEEETTRTALRALRGGASL
LGSTPGERESHSHLPPLASSSAPPGRREEEEGNMQEATAARVEALETVEA
LLVGTLPDFPDLSVPWAAEGGDQHRAAASAGSAAGVGGLSLEAGETVRAL
SLGGAEGAAGFRAKALEAATAAVEEFRSECLSAAGGDGGREAGGEEGEGL
WKRVYCGLLVRLEACSAFMAGPEPPSPPTAVSLPAREGVVVDRRDGHDTS
AAAPPAQAPVAGEGAVGSSVGGESTTAPAARGSPPSSLARLTEGLAEALE
EIPLAYVQAVPPNLDSNDDMTISEKNALRARGGRRRRWMVASTHLLLRAG
AKLCEHYRRSCVGGAPATAVAGGSGSGGEEALASATLVKLLADDPTEAWL
SCMGPPEDTPGLDLAGATAPSAASELTAPIPWESCVHGRALPRHALSAPW
ASHADTVELAKRLVDVAWSALYLGGDDAGGSGPAAAAEMLMRALRAATRA
RGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPA
HQAVGFSLLLRLFAETPPAELRWHRGILLEVLERGIRCGGRDSSASALCM
AAMVRLLRRSPKNGGGGGGGGERAGIRIARETLAQAARATDGTVKAVMVC
GAAALLEVPATGEGYAPCEFLRPALLCLLPILQSPPVSSRLDARAASLRA
VRALCLSCWPRVHAHASKLLCSLIWTCGDCARRASVRRLSSSSPQQPSLG
EVLAANAAAIDPSTDEAVQTYATRLGALVLVLAGDGNGGGASAARSTLRE
ICAAVSVLRPHGAAMEQLADGAFSSEEGAGREGAAAVDGEERCKEVNSPA
GDGGCGDSEVEKRLSSEANSAAKLVS*
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