prot_Ecto-sp13_S_contig2005.6543.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2005.6543.1
Unique Nameprot_Ecto-sp13_S_contig2005.6543.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length369
Homology
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BLAST of mRNA_Ecto-sp13_S_contig2005.6543.1 vs. uniprot
Match: D7FT97_ECTSI (T5orf172 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT97_ECTSI)

HSP 1 Score: 646 bits (1666), Expect = 1.180e-232
Identity = 338/371 (91.11%), Postives = 347/371 (93.53%), Query Frame = 0 
Query:    1 MGAVDETWTKKELQAECKRRGIAGYSRLNKAALLRALQTGDVITPSATGGGSGGGS---TNTQSKGPADLNVAELREECRRRGLQNVSKLKKDELIRLLKDNRKTSSGSGTTPGEAKPREATLEELRAECRKRGMTGFSHLKKQELIRRMADYESSDNGSKGVKASASVARGGKATRIRFLGRGGKEKQQQRARMKGPLRSRAQERFDAGPSPQDTPGFLYIYYESXXXXXXXXDKTREWKIGKTTLDPPERRMKQSAHNNRKTYTLRASWHVPWCGYVEKIVHLDLDDLKVVPSKEKNWDGGGREDGGTEWFRADIDVVEARVKLAIRMVAAREADEADLVGVQPAFCGMFRCGLPIRRRRRHEPKLGTI 368
            MGAVDETWTKKELQAECKRRGI GYSRLNKA+LLRALQTG V+TPSATG          TNTQSKGPADL VAELREECRRRGLQNVSKLKKDELIRLLKDN+K SS SG TPGEAKPREATLEELRAECRKRGMTG+SHLKKQELIRRMADY+SSDNGSKGVKAS SVARGGKATRIRFLGRGGKEKQQQRARMKGPLRSRAQERFDAGPSPQDTPGFLYIY ES XXXXXXXDKT+EWKIGKTTLDPPERRMKQSAHNNRK YTLRASWHVPWCGYVEKIVHLDLDDLKVVP KEK+WDGGGREDGGTEWFRADIDVVEARVKLAIRMVAAREADEAD +GVQPAFCGMFRCGLP+RRRRR EPKLG I
Sbjct:    1 MGAVDETWTKKELQAECKRRGITGYSRLNKASLLRALQTGVVMTPSATGXXXXXXXXXXTNTQSKGPADLTVAELREECRRRGLQNVSKLKKDELIRLLKDNKKPSSSSGNTPGEAKPREATLEELRAECRKRGMTGYSHLKKQELIRRMADYKSSDNGSKGVKASPSVARGGKATRIRFLGRGGKEKQQQRARMKGPLRSRAQERFDAGPSPQDTPGFLYIYCESGXXXXXXXDKTKEWKIGKTTLDPPERRMKQSAHNNRKAYTLRASWHVPWCGYVEKIVHLDLDDLKVVPGKEKSWDGGGREDGGTEWFRADIDVVEARVKLAIRMVAAREADEADFLGVQPAFCGMFRCGLPVRRRRRLEPKLGAI 371
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BLAST of mRNA_Ecto-sp13_S_contig2005.6543.1 vs. uniprot
Match: A0A6H5JBR9_9PHAE (T5orf172 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR9_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 3.360e-145
Identity = 212/221 (95.93%), Postives = 217/221 (98.19%), Query Frame = 0 
Query:  147 MADYESSDNGSKGVKASASVARGGKATRIRFLGRGGKEKQQQRARMKGPLRSRAQERFDAGPSPQDTPGFLYIYYESXXXXXXXXDKTREWKIGKTTLDPPERRMKQSAHNNRKTYTLRASWHVPWCGYVEKIVHLDLDDLKVVPSKEKNWDGGGREDGGTEWFRADIDVVEARVKLAIRMVAAREADEADLVGVQPAFCGMFRCGLPIRRRRRHEPKLGT 367
            MADYESSDNGSKGVKASA+VA+GGKATRIRFLGRGGKEKQQQR RMKGPLRSRAQERFDAGPSPQDTPGFLYIY ES XXXXXXXDKTREWKIGKTTLDPPERRMKQSAHNNRKTYTLRASWHVPWCGYVEKIVHLDLDDLKVVP KEK+WDGGGREDGGTEWFRADI+VVEARVKLAIRMVAAREADEADL+GVQPAFCGMFRCGLPIRRRRRHEPKLGT
Sbjct:    1 MADYESSDNGSKGVKASAAVAQGGKATRIRFLGRGGKEKQQQRVRMKGPLRSRAQERFDAGPSPQDTPGFLYIYCESGXXXXXXXDKTREWKIGKTTLDPPERRMKQSAHNNRKTYTLRASWHVPWCGYVEKIVHLDLDDLKVVPGKEKSWDGGGREDGGTEWFRADIEVVEARVKLAIRMVAAREADEADLLGVQPAFCGMFRCGLPIRRRRRHEPKLGT 221
[Close]
BLAST of mRNA_Ecto-sp13_S_contig2005.6543.1 vs. uniprot
Match: A0A6H5J7I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7I9_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 4.580e-20
Identity = 50/71 (70.42%), Postives = 54/71 (76.06%), Query Frame = 0 
Query:    1 MGAVDETWTKKELQAECKRRGIAGYSRLNKAALLRALQTGDVITPSATGGGSGGGSTNTQSKGPADLNVAE 71
            MGAVD+TWTKKELQAECKRRGIAGYSRLNKA+LLRALQTG++                 QSKGPADLNVAE
Sbjct:    1 MGAVDKTWTKKELQAECKRRGIAGYSRLNKASLLRALQTGNI-----------------QSKGPADLNVAE 54
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2005.6543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT97_ECTSI1.180e-23291.11T5orf172 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBR9_9PHAE3.360e-14595.93T5orf172 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5J7I9_9PHAE4.580e-2070.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 54..115
e-value: 1.1E-7
score: 33.2
IPR018306Bacteriophage T5, Orf172 DNA-bindingPFAMPF10544T5orf172coord: 215..322
e-value: 3.2E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR34449FAMILY NOT NAMEDcoord: 65..98
coord: 120..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2005contigEcto-sp13_S_contig2005:3133..5136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2005.6543.1mRNA_Ecto-sp13_S_contig2005.6543.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2005 2524..5141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2005.6543.1 ID=prot_Ecto-sp13_S_contig2005.6543.1|Name=mRNA_Ecto-sp13_S_contig2005.6543.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=369bp
MGAVDETWTKKELQAECKRRGIAGYSRLNKAALLRALQTGDVITPSATGG
GSGGGSTNTQSKGPADLNVAELREECRRRGLQNVSKLKKDELIRLLKDNR
KTSSGSGTTPGEAKPREATLEELRAECRKRGMTGFSHLKKQELIRRMADY
ESSDNGSKGVKASASVARGGKATRIRFLGRGGKEKQQQRARMKGPLRSRA
QERFDAGPSPQDTPGFLYIYYESGGGGGGGGDKTREWKIGKTTLDPPERR
MKQSAHNNRKTYTLRASWHVPWCGYVEKIVHLDLDDLKVVPSKEKNWDGG
GREDGGTEWFRADIDVVEARVKLAIRMVAAREADEADLVGVQPAFCGMFR
CGLPIRRRRRHEPKLGTI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036361SAP_dom_sf
IPR018306Phage_T5_Orf172_DNA-bd