prot_Ecto-sp13_S_contig2003.6536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2003.6536.1
Unique Nameprot_Ecto-sp13_S_contig2003.6536.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length367
Homology
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Match: D8LHS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS6_ECTSI)

HSP 1 Score: 618 bits (1594), Expect = 9.380e-222
Identity = 330/370 (89.19%), Postives = 340/370 (91.89%), Query Frame = 0
Query:    1 MTSHQHSHCGDNTCNHDHGTSGQADGEEDFHEFLEETHPCCQKDSDAKARALKLRSALDKVDPSQIAERARKAAFSSGSAGPPAFRGGGGDYPALREARTAAAXXXXKDSRSNDGAARGAGYGDGMVEGHNXXXXXXXXXXXXXXX----LDYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHLEIPESGVEAVCRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLRPESAVAATMRIGRVPALACYKGGVRVAYTEQLSQFGNSDGVDPGAVERWLVASGTLEFDPPDANALCEGGGLGMGGDDGDGDDQEAAEARYDCGLDGCHKTFKHNHFLAAGGGGLPKGFGDRV 366
            M SHQHSHCGD+TCNHDHGTSGQ DGEEDFHEFLEETHPCCQKDS+AKARALKLRSALDKVD SQIAERARKAAFSSG AGPPA R GGGDYPALREAR AA XXXX DSR NDGAARGAGYGDG+VEGHN       XXXXXXXX    LDYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLH+E+PESGVE   RGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRL PESAVAATMRI RVPALACYKGGVR AYTEQLSQFGNSDGVDPGAVERWLVASGTLEFDPPDANALCEGGGLG+ GDDGDGDD+E+AEARYDCGLDGCHK FKH+HFLAAGGGGLPKGFG+ V
Sbjct:    1 MASHQHSHCGDSTCNHDHGTSGQVDGEEDFHEFLEETHPCCQKDSEAKARALKLRSALDKVDLSQIAERARKAAFSSGLAGPPASRSGGGDYPALREARAAAXXXXXXDSR-NDGAARGAGYGDGIVEGHNNHSRVDSXXXXXXXXXXXXLDYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHIEVPESGVEEASRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLGPESAVAATMRIRRVPALACYKGGVRTAYTEQLSQFGNSDGVDPGAVERWLVASGTLEFDPPDANALCEGGGLGVVGDDGDGDDEESAEARYDCGLDGCHKAFKHDHFLAAGGGGLPKGFGEGV 369          
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Match: B8C7A0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7A0_THAPS)

HSP 1 Score: 117 bits (293), Expect = 5.150e-26
Identity = 87/235 (37.02%), Postives = 111/235 (47.23%), Query Frame = 0
Query:  148 DYLLDDP-----EITRMAQMRVEAMHADATRLQNLRALGFGLHLEIPESGVEAV------CRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLRPESAVAAT-------MRIGRVPALACYKGGVRVAYTEQLSQFGNSDGVDPGAVERWLVASGTLEFDPPDANALCE---------------GGGLGMGGDDGDGDDQEAAEARYDCGLDGCHKTFKHNH 349
            DYLLD+      EI   AQ R E + A A + Q LR  G+G+H +I  S V A       C       G V+HLYDA S L  SLDL LE  A  Y GT+FVR  L   S ++          + G +P L   K G  V+++  L  F N+  V+ GAVE+WL  +G L   PP   A+C                 GGL   G      D E    RY+CG+DGC+K+F H H
Sbjct:  135 DYLLDEDISNSSEIDMQAQRRAE-LEAKAEQYQILRQYGYGVHRQIHPSRVLASAGFGGSCEDGVVPRGAVVHLYDAYSPLSVSLDLCLEGMASRYPGTKFVR-GLGKASLLSVNDDDTSHRWKNGHLPMLLALKEGAVVSFSSGLRDFNNAGQVESGAVEQWLGIAGVLSDTPPPMGAVCRVRSEEELRLDNVINLHGGLSCDGMASTDKDAEIVNDRYNCGVDGCNKSFFHQH 367          
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Match: B8C799_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C799_THAPS)

HSP 1 Score: 89.7 bits (221), Expect = 4.250e-16
Identity = 80/244 (32.79%), Postives = 111/244 (45.49%), Query Frame = 0
Query:  148 DYLLDDP-----EITRMAQMRVEAMHADATRLQNLRALGFGLHLEIPESGVEAVC-------RGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLRPESAVAAT-------MRIGRVPALACYKGGVRVAYTEQLSQFGNSDG------VDPGAVERWLVASGTLEFDPPDANALCE-----------------GGGLGMGGDDGDGDDQEAAEARYDCGLDGCHKTFKHNH 349
            DYLLD+      E    AQ R E + + A   + +R  G+G+H ++    V A         R +    G V+HLYDA S L  SLDL LE  A  Y GT+F+R  L   S + A         + G +P +   K G  VA++  L  F N+ G      V+P AVE+WL  +G L   PP  +A+C                   GGL           ++  E RYDCG++GC+K+F H H
Sbjct:  166 DYLLDEDIPSSSEYDMQAQRRAE-LESMAHHYEVIRFHGYGVHRQMHPKRVFASAGYGSSTDRDRVTVKGSVVHLYDAYSPLSVSLDLCLEDMASRYPGTKFLR-GLGVTSLLFAEGDGGDQKWKKGDLPMVVALKEGRVVAFSSGLRDFYNAGGDQHNERVEPRAVEQWLEHAGVLFDTPPQMDAVCRIRPEEEMLLENLMKLNMQGGLINAEAPTRSRVEDMEEQRYDCGVNGCNKSFFHEH 407          
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Match: A0A7S2UEH1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEH1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.970e-13
Identity = 101/375 (26.93%), Postives = 155/375 (41.33%), Query Frame = 0
Query:   40 CCQKDSDAKARALKLRSALDKVDPSQIAERARKA--------AFSSGSAGPPAFRGGGGDYPALREARTAAAXXXXKDSRSNDGAARGAGYGDGMVEGHNXXXXXXXXXXXXXXXLDYLLDDP--------------------EITRMAQMRVEAMHADATRLQNLRALGFGLHLEIPESGVEAVCR---GQFRGAG---VVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLRP----ESAVAATMRIGRV------PALACYKGGVRVAYTEQLSQFGN--SDGVDPGAVERWLVASGTLEFDPPDANALCEG--------------GGLGM-----GGDDGDGDDQEAAEARYDCGLDGCHKTFKHNH 349
            CC++D++   R   L + L + D   +AER R+         +F +G        G GG+YPAL +AR++         +++      A         H+                DYLLD+                     E  R A++ +  +H ++  +Q+    G+G+H +   + V         Q RGA    VVLHLY+ +S L ASLDL LE  A  + GT+F+R   R     ES VA  +   +V      PAL   + GV VA+   L+   +  S  ++P AV+ WL  +G L  + P  + LC                  +G      G ++  GDD       Y+CG+ GC+K F H H
Sbjct:   31 CCRRDAEDTRRKDALTTTLRRHDRVALAERRRRIGRHLLPDLSFGAGCRCCYDPNGDGGEYPALVDARSSNFVTNSLTEKTDLERENQA---------HHQPEESDKNDSDDDSEFDYLLDEDLPGSGEGGEANKGDSLLQQLEDDRRAELELAMLHRESA-MQH----GYGVHRQFAPARVFRAADLMVSQGRGAAAPAVVLHLYETNSMLSASLDLFLEELAMDFGGTKFMRADGRSTIILESDVADKVFPKKVRPSDDLPALVAIRDGVVVAFCPSLNGLADRSSQRIEPRAVQEWLDRAGVLRTELPRIDDLCRIRPEEDALYESMLALSAVGQQIPFQGKNELQGDDDVNI---YNCGVPGCNKAFSHEH 388          
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Match: A0A6S8SQX8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8SQX8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.130e-11
Identity = 75/249 (30.12%), Postives = 111/249 (44.58%), Query Frame = 0
Query:  148 DYLLD------------DPEITRMAQMRVEAMHADATRLQNLRALGFGLHLEI-PESGVEAVCRGQF-----RGAGV----VLHLYDADSELGASLDLLLEAKAGSYMGTRFVRC------RLRPESAVAATMRIGR--VPALACYKGGVRVAYTEQLSQFGNSDG--VDPGAVERWL------VASGTLEFDP-----PDANALCEGGGLGMGGDDGDGDDQEAAEAR----YDCGLDGCHKTFKHNH 349
            DYLLD            D  +    Q RV+ +       ++ R  GFG+H ++ PE  + A   G       R A +    ++HLYD +S + ASLD+ LE     Y GT++VR        +  + A  +  ++ R  +PAL   + GV VA   QLS  G++    V+P AVE WL      +    LEF+      P+ +AL E             +  + AE      Y+CG+ GC KTF+H H
Sbjct:  126 DYLLDEDLPVPGTAGGGDNALMAHHQDRVKELQLFMMMNESAREHGFGVHRQLHPERVLHAAGLGMGGVRGNRAAAIPPAAIIHLYDPESTMSASLDVCLEKLGEEYRGTKYVRAGGRATLTMNEDLARESLPKLTRDTLPALIAVRDGVVVACCPQLSSLGDARAGKVEPHAVEAWLDNARVLLREVPLEFEDYCRIRPEEDALLENMMR---------EKAKLAELPPENIYNCGVKGCCKTFRHQH 365          
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Match: A0A1E7FG97_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FG97_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.920e-7
Identity = 73/239 (30.54%), Postives = 101/239 (42.26%), Query Frame = 0
Query:  148 DYLLD------DPEITRMAQMRVEAMHADATRLQNLRALGFGLHLEIPESGVEAVCRGQFRGAG-------------VVLHLYDADSELGASLDLLLEAK-AGSYMGTRFVRC----------RLRPESAVAATMRIGR-VPALACYKGGVRV-AYTEQLSQFGNSDGV-DPGAVERWLVASGTLEFDPPDANALCEGGGLGMGGDDGDGDDQEAA----EARYDCGLDGCHKTFKHNH 349
            DYLLD      D  +  + + R   +       Q     G+G+H ++  + V  +  G  R +              VVLHL D DS   ASLD  LE + A    GT F+R            L  +S  ++ +   R +PAL   + GV V A    L     +DG+ +P AV  WL  SG L  D P  +            D    + Q+ A    E RY+CG+DGCHK+FKH H
Sbjct:  148 DYLLDEDFGMEDEMVRELEEQRRAELEYQILMRQIAGYHGYGVHRQMDPNRVLRIA-GLGRDSASNKASSFLPPPSAVVLHLVDPDSTASASLDYYLETELAKECAGTIFLRSGGRSVLLMDSSLAQKSFPSSILDPDRDMPALIAIRDGVVVNACPRLLGLTSGTDGIIEPHAVRHWLDRSGVLLSDAPIQDICMIRPEQEAHMDFVLSNQQKQAPPPEEKRYNCGIDGCHKSFKHEH 385          
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Match: A0A448Z829_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z829_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.520e-6
Identity = 68/245 (27.76%), Postives = 102/245 (41.63%), Query Frame = 0
Query:  148 DYLLD------DPEITRMAQMRVEAMHADATRLQNLRALGFGLHLEIPESGVEAVC---RGQFRGAGV-------VLHLYDADSELGASLDLLLEAK-AGSYMGTRFVRCRLRPESAVAATMRIGR-------------VPALACYKGGVRVAYTEQLSQFGNSDG-VDPGAVERWLVASGTLEFDPPDANALCEGGGLGMGGDDGDGD------------DQEAAEARYDCGLDGCHKTFKHNH 349
            DYLLD      D  I  + + R   +       Q     G+G+H ++  + V  +    R   +  GV       VLHL D +S   ASLD  +E + A    GT F+R   R  S ++    + R             +PAL   + GV +    +L   G   G ++PGAV  WL  +  L  DPP ++ +C    L    ++   D             +E  E  Y+CG++GCHK F+H H
Sbjct:  139 DYLLDEDFGVEDETIRLLEEERRAELEYQVLVRQVAGHHGYGVHRQLHPTRVLRIGGLGRDAAKSKGVPPPPQAVVLHLVDPESITSASLDYYIEKELAPQCPGTMFLRSGGR--SVLSMDSDLARKSLPPNVLNPDRDLPALVAIRDGVAIHACPRLLGLGAEGGEIEPGAVRHWLDRARVLRTDPP-SDDVC----LIRPEEEAHMDFMLSQAQPPAPAAREEEEDHYNCGVEGCHKYFRHEH 376          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2003.6536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LHS6_ECTSI9.380e-22289.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8C7A0_THAPS5.150e-2637.02Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
B8C799_THAPS4.250e-1632.79Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2UEH1_9STRA4.970e-1326.93Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6S8SQX8_9STRA9.130e-1130.12Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A1E7FG97_9STRA1.920e-730.54Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448Z829_9STRA4.520e-627.76Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 178..307
e-value: 3.4E-9
score: 38.8
NoneNo IPR availablePANTHERPTHR21148PHOSDUCIN-RELATEDcoord: 131..300
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 126..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2003contigEcto-sp13_S_contig2003:5424..9987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2003.6536.1mRNA_Ecto-sp13_S_contig2003.6536.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2003 5385..10594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2003.6536.1 ID=prot_Ecto-sp13_S_contig2003.6536.1|Name=mRNA_Ecto-sp13_S_contig2003.6536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
MTSHQHSHCGDNTCNHDHGTSGQADGEEDFHEFLEETHPCCQKDSDAKAR
ALKLRSALDKVDPSQIAERARKAAFSSGSAGPPAFRGGGGDYPALREART
AAAAAAAKDSRSNDGAARGAGYGDGMVEGHNNNSRVDSDDDDDDDDLDYL
LDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHLEIPESGVEAVCRGQ
FRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLRPESAVAA
TMRIGRVPALACYKGGVRVAYTEQLSQFGNSDGVDPGAVERWLVASGTLE
FDPPDANALCEGGGLGMGGDDGDGDDQEAAEARYDCGLDGCHKTFKHNHF
LAAGGGGLPKGFGDRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf