prot_Ecto-sp13_S_contig2002.6532.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2002.6532.1
Unique Nameprot_Ecto-sp13_S_contig2002.6532.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig2002.6532.1 vs. uniprot
Match: A0A6H5JS45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS45_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 6.660e-62
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 0 
Query:  122 MCPSRTRGVSFYSVPHYQENAYHLHNDNFMPTSTNILSTPCLCDGVELSSCNRFEKTNVRTPQVKQKHGSTNPEFLDVFNTLFDHTLHLNNGEHGTNL 219
            MCPSRT+GVSFYSVPHYQENAYHLHNDNFMPTSTNILSTPCLCDGVELSSCNR EKTNVRTPQ+KQKHGSTNPEFLDVFNTLF+HTLHLN G HGTNL
Sbjct:    1 MCPSRTKGVSFYSVPHYQENAYHLHNDNFMPTSTNILSTPCLCDGVELSSCNRIEKTNVRTPQLKQKHGSTNPEFLDVFNTLFNHTLHLNKGAHGTNL 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2002.6532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JS45_9PHAE6.660e-6293.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2002contigEcto-sp13_S_contig2002:10110..13763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2002.6532.1mRNA_Ecto-sp13_S_contig2002.6532.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2002 10110..13763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2002.6532.1 ID=prot_Ecto-sp13_S_contig2002.6532.1|Name=mRNA_Ecto-sp13_S_contig2002.6532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MEEIRMKPPYAKPANTEGGSNAGSSDAAGDSIFCQEYLKFGGSSEITQRD
FKCPACPVCEVFDLRNVAVKDNTLHIYAPGAETLKMVHQWGNRLPTLRYF
WGGVQKSGSPIVIHDEPIEETMCPSRTRGVSFYSVPHYQENAYHLHNDNF
MPTSTNILSTPCLCDGVELSSCNRFEKTNVRTPQVKQKHGSTNPEFLDVF
NTLFDHTLHLNNGEHGTNL
back to top