prot_Ecto-sp13_S_contig2000.6522.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2000.6522.1
Unique Nameprot_Ecto-sp13_S_contig2000.6522.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.810e-30
Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVLRL 76
            MAS DR+ALVALF  TGGAGWTRRDNW+TDAD  TW GV VNDQGRVV +DL  NNLQG  PKE G+L+KL  L L
Sbjct:    1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADRATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASLCL 76          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 5.010e-30
Identity = 55/74 (74.32%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVL 74
            M STDREALV+LFR TGGAGW RRDNWDTDADL TW+GV VN QGRVV LDL  NNLQG  P E G L+ LR L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: D7FXI0_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI0_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.040e-29
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSL 68
            M+STDREAL+ALFR TGGAGW RRDNWDTDA L TWHGV VNDQGRVV+L L  NNLQGH P++ G L
Sbjct:    1 MSSTDREALIALFRSTGGAGWMRRDNWDTDAVLGTWHGVKVNDQGRVVMLSLDQNNLQGHIPRQLGDL 68          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.230e-27
Identity = 53/74 (71.62%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVL 74
            M+STDREAL+ALFR TGGAGW RRDNWDTDA L TW GV VNDQGRVV L L  NNLQG  P + G+LS L  L
Sbjct:   19 MSSTDREALIALFRSTGGAGWWRRDNWDTDAVLATWDGVNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTAL 92          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 3.660e-27
Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVLRLNNNELSG 83
            MA TDR+ALV L+R TGG  W  R NWDTDADL TWHGV VNDQGRVV L L DNNL+G  P   G L  L+ L L++N+LSG
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHLSSNKLSG 83          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.060e-27
Identity = 54/74 (72.97%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVL 74
            MASTDREAL+ALFR TGGAGW RRD WDTDA L TW G  VNDQGRVV L LS NNLQG+ P EPG L +L+ L
Sbjct:    1 MASTDREALIALFRSTGGAGWKRRDKWDTDAVLATWDGAEVNDQGRVVGLHLSSNNLQGNIPPEPGDLRQLQRL 74          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 6.070e-26
Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVL 74
            MASTDREALVALFR TGGAGW +R NWDTDA + TWHGV VN QGRVV L L  N+L+GH P E G+LS+L+ L
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 5.120e-25
Identity = 47/72 (65.28%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLR 72
            MA TDR+ALVAL+R TGG  W    NWDTDADL TWHGV VNDQGRVV L L DNNL+G  P   G L+ L+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: D8LHD4_ECTSI (Putative leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 9.790e-25
Identity = 53/76 (69.74%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVLRL 76
            MASTDREAL A+FR TGGAGW RR NWDTDA L TW GV VN+QGRVV LDL  NNLQG  P E G L+ L  L L
Sbjct:    1 MASTDREALSAVFRLTGGAGWRRRRNWDTDAALETWEGVKVNNQGRVVTLDLPGNNLQGTIPVELGKLTALEALIL 76          
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.450e-22
Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVILDLSDNNLQGHFPKEPGSLSKLRVLRLN 77
            MASTDREAL+ALFR T G GW+RR NW TDA+L TW GV VN QGRVV L L+ NNLQG  P   G L+ L+ L LN
Sbjct:    1 MASTDREALIALFRLTCGYGWSRRGNWGTDAELATWDGVQVNGQGRVVKLGLAANNLQGPIPPALGKLAALQDLYLN 77          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2000.6522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQQ0_9PHAE2.810e-3072.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQP2_9PHAE5.010e-3074.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXI0_ECTSI1.040e-2976.47Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5L6T0_9PHAE1.230e-2771.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI3.660e-2763.86Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LF46_ECTSI5.060e-2772.97LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX56_ECTSI6.070e-2670.27LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JK91_9PHAE5.120e-2565.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD4_ECTSI9.790e-2569.74Putative leucine rich repeat protein n=1 Tax=Ectoc... [more]
D8LJS7_ECTSI1.450e-2264.94LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..89
e-value: 5.1E-26
score: 93.0
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2000contigEcto-sp13_S_contig2000:12220..13024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2000.6522.1mRNA_Ecto-sp13_S_contig2000.6522.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2000 12207..15027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2000.6522.1 ID=prot_Ecto-sp13_S_contig2000.6522.1|Name=mRNA_Ecto-sp13_S_contig2000.6522.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MASTDREALVALFRWTGGAGWTRRDNWDTDADLVTWHGVTVNDQGRVVIL
DLSDNNLQGHFPKEPGSLSKLRVLRLNNNELSGEECNHFLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf