prot_Ecto-sp13_S_contig19995.6505.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig19995.6505.1
Unique Name	prot_Ecto-sp13_S_contig19995.6505.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	93

Homology

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 3.770e-54
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGRPWSG 93
            MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGIL VTNLVLFGAAVAEMVWMWCAVKMEENG PWSG
Sbjct:  942 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKMEENGSPWSG 1034

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 8.710e-21
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGRP 90
            M FAF+V+SE LAP+AS WD W+SR GH ++FV+M+VALLLKVDVS+ER  SQR+F  +L   +  +    V E V + CA+ + E   P
Sbjct: 1966 MAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGP 2055

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 4.080e-20
Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGRP 90
            M FAF+++SE LAPFAS WD W++R GH ++FV+M++ALLLKVDVS ER GSQR++  +L   +  +  A + E   +  ++K+E+   P
Sbjct: 1155 MAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEP 1244

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: A0A6H5KP34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP34_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 7.560e-20
Identity = 40/90 (44.44%), Postives = 58/90 (64.44%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGRP 90
            MT  F V+SE L P A AWD WVSR  H ++F++++VALLLKVDVSDE+  SQ++F  +L   +  +  A V E + + C  +++E   P
Sbjct:   55 MTVVFAVLSEALHPNAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSDEKRSSQKVFEAVLVAAHACMVLAVVVETIVLGCPSRVKEQHEP 144

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 9.110e-19
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGRP 90
            MT  F V+SE L P+A AWD WVSR  H ++F++++VALLLKVDVS+E+  SQ++F  +L   +  +  A V E + + C  +++E   P
Sbjct:  916 MTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEP 1005

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 9.320e-19
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGRP 90
            MT  F V+SE L P+A AWD WVSR  H ++F++++VALLLKVDVS+E+  SQ++F  +L   +  +  A V E + + C  +++E   P
Sbjct: 2654 MTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEP 2743

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.270e-18
Identity = 37/76 (48.68%), Postives = 57/76 (75.00%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMV 76
            + FAF+++SEVL+P++S WD WV+R GH+++FV+MFVALLLKVDV+DE   SQ++F  +L   ++ +    V E +
Sbjct:  597 IAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAI 672

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 4.320e-18
Identity = 39/85 (45.88%), Postives = 59/85 (69.41%), Query Frame = 0

Query:    5 FLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGR 89
            F +ISE LAP+AS WD W+ R GH ++ V+M+VALLLKVDVSDER  SQR+F  +L   ++ + G  + E++    ++ +E+ G+
Sbjct:  880 FAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQ 964

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 8.140e-18
Identity = 38/74 (51.35%), Postives = 54/74 (72.97%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAE 74
            + FAF ++SE LAP+AS WD W+SR GHI++F++M+VALLLKVDVSDER  SQ +F  +L   ++ +    + E
Sbjct: 1411 IAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVE 1484

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BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 8.160e-18
Identity = 39/87 (44.83%), Postives = 60/87 (68.97%), Query Frame = 0

Query:    1 MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEEN 87
            + F F++ISE LAP+AS WD W++R GH+++  +M++ALLLKVDVS ER  SQ +F  +L V ++V+    VAE + +  A++ E  
Sbjct: 1511 VAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERR 1597

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig19995.6505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRV1_ECTSI	3.770e-54	97.85	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G5Y7_ECTSI	8.710e-21	51.11	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
D7G301_ECTSI	4.080e-20	46.67	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
A0A6H5KP34_9PHAE	7.560e-20	44.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FHH1_ECTSI	9.110e-19	43.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FHG7_ECTSI	9.320e-19	43.33	LNR domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LH65_ECTSI	2.270e-18	48.68	Polymorphic outer membrane protein G/I family prot...	[more]
D7G2Z8_ECTSI	4.320e-18	45.88	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K0E9_9PHAE	8.140e-18	51.35	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LSC0_ECTSI	8.160e-18	44.83	Polymorphic Outer membrane protein G/I family n=3 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 80..93
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 28..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..79
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 44..54
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..18 score: 0.648
None	No IPR available	TMHMM	TMhelix		coord: 55..77
None	No IPR available	TMHMM	TMhelix		coord: 21..40

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig19995	contig	Ecto-sp13_S_contig19995:2128..2406 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig19995.6505.1	mRNA_Ecto-sp13_S_contig19995.6505.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig19995 2128..2406 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig19995.6505.1 ID=prot_Ecto-sp13_S_contig19995.6505.1|Name=mRNA_Ecto-sp13_S_contig19995.6505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
MTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDERE
GSQRLFAGILGVTNLVLFGAAVAEMVWMWCAVKMEENGRPWSG