prot_Ecto-sp13_S_contig19910.6477.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19910.6477.1
Unique Nameprot_Ecto-sp13_S_contig19910.6477.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length336
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19910.6477.1 vs. uniprot
Match: D7G039_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G039_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 8.380e-188
Identity = 287/335 (85.67%), Postives = 308/335 (91.94%), Query Frame = 0 
Query:    1 MPATRATFTSTFKITTSATLAMRLASVNNGRTIPNKRMRNEPDGDDLAFDLEAIRPCKRHRIPHYTEADEELLVSILVHEYENSVMDSPCPQAEQQHRHTTLDDDALYAVMKEQEASIAALTARAKLYAQQVATASDELQKAIAKAVEQEAIADKARAKRHDRAMEYVGASAIYEGSQLYDEPCREQCRKRARQERKPMPSSNLQQASKDDIYELIWLQKQSHLQEARKTFEEEQRTLRTRKAERDQLAREHDKAETVASAALESLGKRVTQAEVDAFDSLLEFKQAYADTPCDSSRINTLWAVCDVMDELMDEPSPQQSKSVGRRKTKRTRSSR 335
            MPAT ATFTSTFKITTSATLAMRLASVNNGRTIPNKRMRNE DGDDLAFDLEA RPCKRHRI +YTEA+E+LLVSILV  YEN+V DSPCPQAEQQH+HTT  D+ALYA MKE EAS AAL ARAK+YAQQVA AS++LQKAIA+A EQEAIADKARA RHDRAM+YVGASAIYEGSQLYDEPCREQC+KRARQERKPMP S+LQQAS+DDIYELIWLQ+QSHLQEARK FE EQ+TL T+KAERDQLAREHDKAET ASAALESL KR+ QAEVDAFDSLLEFKQAYADTPCDSSR NTLWAVCDV+DEL+D PSPQQ KS GRR+TKRTRSSR
Sbjct:    1 MPATTATFTSTFKITTSATLAMRLASVNNGRTIPNKRMRNELDGDDLAFDLEANRPCKRHRIQYYTEAEEDLLVSILVQGYENAVKDSPCPQAEQQHQHTTPKDEALYAAMKEHEASTAALAARAKVYAQQVAAASEDLQKAIAEAREQEAIADKARANRHDRAMQYVGASAIYEGSQLYDEPCREQCKKRARQERKPMPFSDLQQASEDDIYELIWLQRQSHLQEARKNFEAEQKTLLTKKAERDQLAREHDKAETAASAALESLRKRMKQAEVDAFDSLLEFKQAYADTPCDSSRFNTLWAVCDVIDELVDGPSPQQRKSAGRRRTKRTRSSR 335
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BLAST of mRNA_Ecto-sp13_S_contig19910.6477.1 vs. uniprot
Match: A0A6H5K3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X7_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 5.760e-43
Identity = 82/99 (82.83%), Postives = 90/99 (90.91%), Query Frame = 0 
Query:  236 RTLRTRKAERDQLAREHDKAETVASAALESLGKRVTQAEVDAFDSLLEFKQAYADTPCDSSRINTLWAVCDVMDELMDEPSPQQSKSVGRRKTKRTRSS 334
            +TL T++AERDQLAREHDKAET ASAALESLGKRVTQAEVDAFDSL+ FK+A ADTPCD SR+ TLWAVCDV+DELMDEPSPQ SK  GRR+TKRTRSS
Sbjct:    6 KTLHTKRAERDQLAREHDKAETAASAALESLGKRVTQAEVDAFDSLVGFKEACADTPCDCSRLKTLWAVCDVIDELMDEPSPQ-SKRAGRRRTKRTRSS 103
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BLAST of mRNA_Ecto-sp13_S_contig19910.6477.1 vs. uniprot
Match: A0A6H5K6A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6A7_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.440e-26
Identity = 68/83 (81.93%), Postives = 71/83 (85.54%), Query Frame = 0 
Query:   68 ADEELLVSILVHEYENSVMDSPCPQAEQQHRHTTLDDDALYAVMKEQEASIAALTARAKLYAQQVATASDELQKAIAKAVEQE 150
            ADEELLVSIL  EYENSVMDSPC QAEQQHRHTTL DDALY  MKEQEAS AAL ARAK YAQ+VA AS+ LQKAIA+A EQE
Sbjct:    6 ADEELLVSILPQEYENSVMDSPCRQAEQQHRHTTLGDDALYTAMKEQEASTAALIARAKAYAQEVAAASENLQKAIAEAREQE 88
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19910.6477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G039_ECTSI8.380e-18885.67Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5K3X7_9PHAE5.760e-4382.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6A7_9PHAE1.440e-2681.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..251
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availableCOILSCoilCoilcoord: 111..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19910contigEcto-sp13_S_contig19910:567..2698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19910.6477.1mRNA_Ecto-sp13_S_contig19910.6477.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19910 567..2698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19910.6477.1 ID=prot_Ecto-sp13_S_contig19910.6477.1|Name=mRNA_Ecto-sp13_S_contig19910.6477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=336bp
MPATRATFTSTFKITTSATLAMRLASVNNGRTIPNKRMRNEPDGDDLAFD
LEAIRPCKRHRIPHYTEADEELLVSILVHEYENSVMDSPCPQAEQQHRHT
TLDDDALYAVMKEQEASIAALTARAKLYAQQVATASDELQKAIAKAVEQE
AIADKARAKRHDRAMEYVGASAIYEGSQLYDEPCREQCRKRARQERKPMP
SSNLQQASKDDIYELIWLQKQSHLQEARKTFEEEQRTLRTRKAERDQLAR
EHDKAETVASAALESLGKRVTQAEVDAFDSLLEFKQAYADTPCDSSRINT
LWAVCDVMDELMDEPSPQQSKSVGRRKTKRTRSSR*
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