prot_Ecto-sp13_S_contig19902.6473.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19902.6473.1
Unique Nameprot_Ecto-sp13_S_contig19902.6473.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19902.6473.1 vs. uniprot
Match: A0A6H5JL89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL89_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.270e-25
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0 
Query:    1 TAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLGHGHQHGR 49
            TAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLG GHQHGR
Sbjct:   46 TAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLGQGHQHGR 94
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BLAST of mRNA_Ecto-sp13_S_contig19902.6473.1 vs. uniprot
Match: D7FQD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD5_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 4.140e-25
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0 
Query:    1 TAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLGHGHQHGR 49
            TAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLG GH HGR
Sbjct:   12 TAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLGQGHPHGR 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19902.6473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JL89_9PHAE1.270e-2597.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQD5_ECTSI4.140e-2595.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19902contigEcto-sp13_S_contig19902:833..3216 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19902.6473.1mRNA_Ecto-sp13_S_contig19902.6473.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19902 833..3216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19902.6473.1 ID=prot_Ecto-sp13_S_contig19902.6473.1|Name=mRNA_Ecto-sp13_S_contig19902.6473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
TAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLGHGHQHGR*
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