prot_Ecto-sp13_S_contig1990.6471.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1990.6471.1
Unique Name	prot_Ecto-sp13_S_contig1990.6471.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	699

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1990.6471.1 vs. uniprot
Match: D8LT82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT82_ECTSI)

HSP 1 Score: 919 bits (2375), Expect = 0.000e+0
Identity = 585/711 (82.28%), Postives = 603/711 (84.81%), Query Frame = 0

Query:    1 SAELEKEKNKKATTVVNSPAPDAVEEGLRGAIRDLRRQSSGQLSEEVEARRKAVGELEAALXXXXXKEVAAAEANEELSNLRSELAKTQEQVQALHQSAATAKALANATALLPPEPLPPSEATEAPAAETTTPSQDTSEEVRILQPVDYDGLVDRALSQEEEGLGELRRKAKDAGVTQRHCDKADKVFSDVVDCCGDGLSSVESILKGTKTIADEDASSIQEALAVALERAIASSSVLLKEALVGRIRACEAEKQVSLEQEAAEEERAKAAALAQEKTVLVDELQQHLVQVRMLRKEVGALRQE------------EMTEAAEGMHVQAAEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDTGTWRRRYEHLAGLLAEQTKQNSAMASRLATSGRTRPSSSRRSSPRRRIVPPAETRLSLGTPTASPEERRPHFTGPSTAVSKNGGAKPRSSPKRVNRSSNTSPRPPSPAIAEVSGQEVGTGSRATLVSTGVSASNSPPPFVDTAATVGVSDVRVGASRKSSMDSGVQVGGGPTQPVVETSDGGTQADYDGVAATNDANVAISPVVALEQPSGRSNAESNNGNPAVEQPEPSKAPLVEAAETPSTAAAEDRSKGMTAEEESKGTLQAQEVAEGLDNGADQAGSAYTTAIMEETDGMVPAKRPKTVEEPRGDGVLEPEREEQAAGSSIVETRETKDTSATTKGEHGKE 699
            SAELEKEKNKKATTVVNSPAPDAVEEGLRGAIRDLRRQSSGQLSEEVEARRKAVGELEAAL     KEVAAAEAN ELSNLR ELAKTQEQVQALH+SAATAKALA+A+A LPPEPLP SEATEAPAAETTTPS+DTSEE+ ILQPVDYDGLVDRALSQE+ GLGELRRKAKDAGVTQRHCDKADK+FSDVVDCCG+GLSSVESIL+GTKTI DEDASSIQEALA ALERAIASSSVLLKEALVGRIRACEAEK+VSLEQEAAEEERAKA AL+QE  VLVDELQQHLVQVR LRKEVGALRQE            EM EAA GMH Q AEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXX DDTGTWRRRYEHLAGLLA QTKQNSAMASRLATSGRT PSSSRRSSPRRRIVPPAET LSLGTPTASPEER PH TGPSTAVSKNGGAKPRSSPKR NRSSNTSPRPPSPAIAEVSGQEVGTGSRATLVSTGVSASNSPPP VDTA TVGVSDVRVGA RK+S+DSGVQVGGGPTQPVVETSDGGTQADYDGVA TNDA+V +SPVVAL QPS  SNAESNNGNPAVEQPEPS                                                       AIME TDGMVPAKRP+TVE+PRGDG LEPEREEQ AGSSIVETRET+DTSATT GE GKE
Sbjct:  452 SAELEKEKNKKATTVVNSPAPDAVEEGLRGAIRDLRRQSSGQLSEEVEARRKAVGELEAALEQARKKEVAAAEANAELSNLRLELAKTQEQVQALHESAATAKALADASASLPPEPLPLSEATEAPAAETTTPSRDTSEEINILQPVDYDGLVDRALSQEKVGLGELRRKAKDAGVTQRHCDKADKMFSDVVDCCGNGLSSVESILEGTKTIVDEDASSIQEALAAALERAIASSSVLLKEALVGRIRACEAEKKVSLEQEAAEEERAKAVALSQENMVLVDELQQHLVQVRTLRKEVGALRQENQHARLQQQHQEEMAEAAGGMHAQDAEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDTGTWRRRYEHLAGLLAVQTKQNSAMASRLATSGRTGPSSSRRSSPRRRIVPPAETPLSLGTPTASPEERLPHSTGPSTAVSKNGGAKPRSSPKRANRSSNTSPRPPSPAIAEVSGQEVGTGSRATLVSTGVSASNSPPPLVDTATTVGVSDVRVGAPRKASVDSGVQVGGGPTQPVVETSDGGTQADYDGVATTNDADVPVSPVVALAQPSDSSNAESNNGNPAVEQPEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIMEATDGMVPAKRPETVEDPRGDGALEPEREEQVAGSSIVETRETRDTSATTNGEGGKE 1162

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BLAST of mRNA_Ecto-sp13_S_contig1990.6471.1 vs. uniprot
Match: A0A6H5KI80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI80_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 2.350e-32
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0

Query:  619 AQEVAEGLDNGADQAGSAYTTAIMEETDGMVPAKRPKTVEEPRGDGVLEPEREEQAAGSSIVETRETKDTSATTKGEHGKE 699
            AQEVAEGLDNGADQ GSA TTAIMEETDGMVPAKRPKTVE+PRGDGVLEPEREEQ AGSSIVETRETKDTSAT+KGE GKE
Sbjct:   43 AQEVAEGLDNGADQGGSACTTAIMEETDGMVPAKRPKTVEDPRGDGVLEPEREEQVAGSSIVETRETKDTSATSKGEGGKE 123

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1990.6471.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1990.6471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LT82_ECTSI	0.000e+0	82.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KI80_9PHAE	2.350e-32	92.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 284..304
None	No IPR available	COILS	Coil	Coil	coord: 47..98
None	No IPR available	COILS	Coil	Coil	coord: 255..275

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1990	contig	Ecto-sp13_S_contig1990:3565..8387 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1990.6471.1	mRNA_Ecto-sp13_S_contig1990.6471.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1990 3565..8387 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1990.6471.1 ID=prot_Ecto-sp13_S_contig1990.6471.1|Name=mRNA_Ecto-sp13_S_contig1990.6471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=699bp
SAELEKEKNKKATTVVNSPAPDAVEEGLRGAIRDLRRQSSGQLSEEVEAR
RKAVGELEAALEQARKKEVAAAEANEELSNLRSELAKTQEQVQALHQSAA
TAKALANATALLPPEPLPPSEATEAPAAETTTPSQDTSEEVRILQPVDYD
GLVDRALSQEEEGLGELRRKAKDAGVTQRHCDKADKVFSDVVDCCGDGLS
SVESILKGTKTIADEDASSIQEALAVALERAIASSSVLLKEALVGRIRAC
EAEKQVSLEQEAAEEERAKAAALAQEKTVLVDELQQHLVQVRMLRKEVGA
LRQEEMTEAAEGMHVQAAEANPPPQEEVIDVAASPSPHAAAEEEPPPTVV
ADDTGTWRRRYEHLAGLLAEQTKQNSAMASRLATSGRTRPSSSRRSSPRR
RIVPPAETRLSLGTPTASPEERRPHFTGPSTAVSKNGGAKPRSSPKRVNR
SSNTSPRPPSPAIAEVSGQEVGTGSRATLVSTGVSASNSPPPFVDTAATV
GVSDVRVGASRKSSMDSGVQVGGGPTQPVVETSDGGTQADYDGVAATNDA
NVAISPVVALEQPSGRSNAESNNGNPAVEQPEPSKAPLVEAAETPSTAAA
EDRSKGMTAEEESKGTLQAQEVAEGLDNGADQAGSAYTTAIMEETDGMVP
AKRPKTVEEPRGDGVLEPEREEQAAGSSIVETRETKDTSATTKGEHGKE