prot_Ecto-sp13_S_contig19894.6465.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19894.6465.1
Unique Nameprot_Ecto-sp13_S_contig19894.6465.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length89
Homology
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A6H5KV38_9PHAE (Exportin-T (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV38_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.640e-45
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 0
Query:    1 MRVSNSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCSCILEVVNKVGVPPL 88
            MRVSNSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNE+FLQLFLGCL STDEQLVRRSCSCILEVVNK    P+
Sbjct:  215 MRVSNSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNEQFLQLFLGCLMSTDEQLVRRSCSCILEVVNKKMAHPV 302          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 2.390e-44
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0
Query:    1 MRVSNSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCSCILEVVNKVGVPPL 88
            MRVSN+VAQICGVIYEVVAAF+TEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCSCILEVVNK    P+
Sbjct:  214 MRVSNAVAQICGVIYEVVAAFETEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCSCILEVVNKKMAHPV 301          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.070e-13
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MRVSNSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTD--EQLVRRSCSCILEVVNK 82
            MR +   A +  V++  V  ++ ++P+LAAFALE+L K IGWIDIA VVN++ LQL   CL   D   +L + + +C+ EVV K
Sbjct:  192 MRGTGVPADVARVVFTTVTTYRADLPELAAFALESLSKLIGWIDIALVVNDKMLQLLYDCLERADGGPELAQAAAACLEEVVLK 275          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A835PHH6_VANPL (Exportin-T n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PHH6_VANPL)

HSP 1 Score: 64.7 bits (156), Expect = 3.550e-10
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 MRVSNSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRS--TDEQLVRRSCSCILEVVNK 82
            MR+   V QI    +++++ +++  P LAA  L+T+++YIGWIDI  V N+ FL LF   L S  T E L   S SC+L +++K
Sbjct:  179 MRI-QCVPQIVRTWFDIISLYRSTEPALAAATLDTMRRYIGWIDIGLVANDAFLPLFFDLLLSPATPEMLRSASASCVLAMISK 261          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A1Y1IKH1_KLENI (Exportin-T n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKH1_KLENI)

HSP 1 Score: 64.7 bits (156), Expect = 3.550e-10
Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    7 VAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCS--CILEVVNK 82
            + QI    Y +V A+K+  P LAA  LE +QKY+ W+DI  V NERF+ L  G L S  E    R  +  C+L +V+K
Sbjct:  182 IGQILEACYSLVVAYKSVNPTLAAATLEAVQKYVAWVDIGLVANERFVPLLFGFLASAAEPFKLRGAASDCLLAIVSK 259          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A250XMU3_9CHLO (Exportin-T n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XMU3_9CHLO)

HSP 1 Score: 64.7 bits (156), Expect = 3.560e-10
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    5 NSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCSCILEVVNK 82
            +S++ I    Y +V  ++T+ P LA   L+T+Q+Y+ WIDI+ V + +F+ L L  L S+D  L   +  C+ EVV+K
Sbjct:  183 HSISDIASAWYALVDLYRTKRPALATSVLQTMQRYVPWIDISLVAHPKFVALLLSLLESSDTALAAAAADCLTEVVSK 260          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A0D2KJN1_9CHLO (Exportin-T n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KJN1_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 5.560e-9
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   15 YEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCSCILEVVNK 82
            Y++  A +   PQLAAF L T  +YI WIDI  V N+RF+ L L  + S    L   +  C++EVV+K
Sbjct:  194 YQLALAHRAARPQLAAFVLATAARYIHWIDIGLVANDRFMPLLLELMESPHSALRAAATDCVIEVVSK 261          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A8J5F3H0_ZINOF (Exportin-T n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F3H0_ZINOF)

HSP 1 Score: 61.2 bits (147), Expect = 5.860e-9
Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    7 VAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRS--TDEQLVRRSCSCILEVVNK 82
            V QI    ++V++ + +  P LAAFAL+T+++YI WIDI  V N+ F+ LF G + +  + +QL   S SCIL ++ K
Sbjct:  184 VPQIARHWFDVLSLYHSSDPSLAAFALDTMRRYITWIDIGLVANDAFVPLFFGLILAPGSTDQLRAASGSCILAIILK 261          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A6J8DGJ6_MYTCO (Exportin-T n=3 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8DGJ6_MYTCO)

HSP 1 Score: 60.5 bits (145), Expect = 1.110e-8
Identity = 28/85 (32.94%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    5 NSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRS-CSCILEVVNKVGVPPL 88
             +V Q+ G  YE++  ++T  P++    L+ + K+I WIDI  + N++F+ + L  +  T   L+R S C CI +++NK G+ P+
Sbjct:  209 QAVGQLAGTWYEILTTYETSNPEVVCMCLDVIGKFISWIDINLIANDKFVTVLLNFMTLT---LIRESACDCITDILNK-GMDPI 289          
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Match: A0A2V0NUT8_9CHLO (Exportin-T n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NUT8_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 2.060e-8
Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   15 YEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVNERFLQLFLGCLRSTDEQLVRRSCSCILEVVNK 82
            YE+  A +   PQLAAF L T  +Y+ WIDI  V N++F+ L L  + +    L   +  C++EVV+K
Sbjct:  197 YELALAHRASRPQLAAFVLTTAARYVHWIDIGLVANDKFMPLLLELMEAPHSGLRAAATDCVIEVVSK 264          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19894.6465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV38_9PHAE1.640e-4592.05Exportin-T (Fragment) n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FNT8_ECTSI2.390e-4492.05Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CAL0_9STRA1.070e-1344.05Exportin-T n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A835PHH6_VANPL3.550e-1040.48Exportin-T n=1 Tax=Vanilla planifolia TaxID=51239 ... [more]
A0A1Y1IKH1_KLENI3.550e-1042.31Exportin-T n=1 Tax=Klebsormidium nitens TaxID=1052... [more]
A0A250XMU3_9CHLO3.560e-1037.18Exportin-T n=1 Tax=Chlamydomonas eustigma TaxID=11... [more]
A0A0D2KJN1_9CHLO5.560e-942.65Exportin-T n=1 Tax=Monoraphidium neglectum TaxID=1... [more]
A0A8J5F3H0_ZINOF5.860e-941.03Exportin-T n=6 Tax=Zingiber officinale TaxID=94328... [more]
A0A6J8DGJ6_MYTCO1.110e-832.94Exportin-T n=3 Tax=Mytilus coruscus TaxID=42192 Re... [more]
A0A2V0NUT8_9CHLO2.060e-839.71Exportin-T n=1 Tax=Raphidocelis subcapitata TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..87
e-value: 4.0E-17
score: 63.2
IPR013598Exportin-1/Importin-beta-likePFAMPF08389Xpo1coord: 4..76
e-value: 6.5E-9
score: 36.0
IPR040017Exportin-TPANTHERPTHR15952EXPORTIN-T/LOS1coord: 4..82
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19894contigEcto-sp13_S_contig19894:1875..2519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19894.6465.1mRNA_Ecto-sp13_S_contig19894.6465.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19894 1875..2537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19894.6465.1 ID=prot_Ecto-sp13_S_contig19894.6465.1|Name=mRNA_Ecto-sp13_S_contig19894.6465.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
MRVSNSVAQICGVIYEVVAAFKTEVPQLAAFALETLQKYIGWIDIAQVVN
ERFLQLFLGCLRSTDEQLVRRSCSCILEVVNKVGVPPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR013598Exportin-1/Importin-b-like
IPR040017XPOT
IPR016024ARM-type_fold