prot_Ecto-sp13_S_contig19890.6464.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19890.6464.1
Unique Nameprot_Ecto-sp13_S_contig19890.6464.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length226
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19890.6464.1 vs. uniprot
Match: D7G7A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A0_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 1.940e-87
Identity = 165/188 (87.77%), Postives = 165/188 (87.77%), Query Frame = 0 
Query:   26 FAGNNGNGAVHARAPSTGNEDFSDFQGSSSAPXXXXXXET-------AGAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKVAEQKVVEQTFQSNNNSFAGLDGFKAPQPQGMGMNRPLSGMTGLSGGAGTGMMMGGGMGVQQPMQQPMQ----MQGGWMGAPQQGMGGAGGMGAWAQQQQXXXPGQGF 202
            FAGNNGNGAVHARAPSTGNEDFSDFQGSSS  XXXXXX          GAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKVAEQKVVEQTFQSNNNSFAGLDGFKAPQPQGMGMNRPLSGMTGLSGGAGTGMMMGGGMGVQQP          MQGGWMGAPQQGMGGAGGMGAWAQQQQXXX GQGF
Sbjct:  292 FAGNNGNGAVHARAPSTGNEDFSDFQGSSSXXXXXXXXXXXXXXXXXTGAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKVAEQKVVEQTFQSNNNSFAGLDGFKAPQPQGMGMNRPLSGMTGLSGGAGTGMMMGGGMGVQQPXXXXXXXXXXMQGGWMGAPQQGMGGAGGMGAWAQQQQXXXXGQGF 479
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BLAST of mRNA_Ecto-sp13_S_contig19890.6464.1 vs. uniprot
Match: A0A6H5JZR7_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR7_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.410e-26
Identity = 63/79 (79.75%), Postives = 64/79 (81.01%), Query Frame = 0 
Query:   26 FAGNNGNGAVHARAPSTGNEDFSDFQGSSSAPXXXXXXETA-----GAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKV 99
            F+GNNGNGAVHARAPSTGNEDFSDFQG S AP        A     GAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKV
Sbjct:  485 FSGNNGNGAVHARAPSTGNEDFSDFQGCSGAPGGGGETTGAASGGTGAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKV 563
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19890.6464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7A0_ECTSI1.940e-8787.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZR7_9PHAE2.410e-2679.75ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19890contigEcto-sp13_S_contig19890:1368..3218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19890.6464.1mRNA_Ecto-sp13_S_contig19890.6464.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19890 1368..3218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19890.6464.1 ID=prot_Ecto-sp13_S_contig19890.6464.1|Name=mRNA_Ecto-sp13_S_contig19890.6464.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
AFGDPFAAAPAVVPTTTAIGGGGSAFAGNNGNGAVHARAPSTGNEDFSDF
QGSSSAPGGGGGGETAGAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKVA
EQKVVEQTFQSNNNSFAGLDGFKAPQPQGMGMNRPLSGMTGLSGGAGTGM
MMGGGMGVQQPMQQPMQMQGGWMGAPQQGMGGAGGMGAWAQQQQQQQPGQ
GFGMGGGMMGGMQGAGAGAGGAGMGM
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