prot_Ecto-sp13_S_contig1988.6455.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1988.6455.1
Unique Nameprot_Ecto-sp13_S_contig1988.6455.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length247
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1988.6455.1 vs. uniprot
Match: D7FQA7_ECTSI (Hypothetical leucine rich repeat and MORN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQA7_ECTSI)

HSP 1 Score: 466 bits (1198), Expect = 1.130e-147
Identity = 237/247 (95.95%), Postives = 240/247 (97.17%), Query Frame = 0 
Query:    1 GDAVQILNREHEFCGFTGRVLHVDSRDPGREVAEVKIDDGTARVVFVRLLSHEVGSEDIPVVNMLKINRQELRHHEPEELDLVRDALLAWADREREKWRPQLAAVAIQRRIRGFIARRSTARRRYRHWTRERALRLTFLRALDVNNTATYQAVRAAVKMRVIRATDVPTNMPWIPLVPPRLEEAFKRRRRRIILQEEIRTRTAERMALIKKNPRKLQWKTPTHGPLIRPYHPYKEAWARLLSKVAHP 247
            GDAVQILNREHEFCGFTGRVLHVDSRDPGREVAEVKIDDGTARVVFVRLLSHEVGSEDIPVVNMLKINRQELRHHEPEEL LVRDALLAWADREREKWR QLAAVAIQRRIRGFIARRSTARRRYRHWTRERALRLTFLRALDVNN ATYQAVRAAV MRVIRATDVPTNMPWIP VPPRLEEAFKRRRRRIILQEEIRTRTAERMAL+ KNPRKLQWKTPT+GPLIRPY+PYKEAWARLLSKV HP
Sbjct: 1541 GDAVQILNREHEFCGFTGRVLHVDSRDPGREVAEVKIDDGTARVVFVRLLSHEVGSEDIPVVNMLKINRQELRHHEPEELALVRDALLAWADREREKWRTQLAAVAIQRRIRGFIARRSTARRRYRHWTRERALRLTFLRALDVNNAATYQAVRAAVMMRVIRATDVPTNMPWIPPVPPRLEEAFKRRRRRIILQEEIRTRTAERMALVDKNPRKLQWKTPTYGPLIRPYNPYKEAWARLLSKVTHP 1787
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BLAST of mRNA_Ecto-sp13_S_contig1988.6455.1 vs. uniprot
Match: A0A6H5L4E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E1_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.530e-40
Identity = 104/236 (44.07%), Postives = 106/236 (44.92%), Query Frame = 0 
Query:    1 GDAVQILNREHEFCGFTGRVLHVDSRDPGREVAEVKIDDGTARVVFVRLLSHEVGSEDIPVVNMLKINRQELRHHEPEELDLVRDALLAWADREREKWRPQLAAVAIQRRIRGFIARRSTARRRYRHWTRERALRLTFLRALDVNNTATYQAVRAAVKMRVIRATDVPTNMPWIPLVPPRLEEAFKRRRRRIILQEEIRTRTAERMALIKKNPRKLQWKTPTHGPLIRPYHPYKEA 236
            GDAVQILNREHEFCGFTGRVLHVD RDPGREVAE                                INRQELRHHEPEEL LVRDALLAWADREREKWRPQLAAVAIQRRIR                                                                                              ALI KN +KLQWKTPT+GPLIRPYHPYKEA
Sbjct:  363 GDAVQILNREHEFCGFTGRVLHVDCRDPGREVAE--------------------------------INRQELRHHEPEELALVRDALLAWADREREKWRPQLAAVAIQRRIR----------------------------------------------------------------------------------------------ALINKNSKKLQWKTPTYGPLIRPYHPYKEA 472
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1988.6455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQA7_ECTSI1.130e-14795.95Hypothetical leucine rich repeat and MORN domain-c... [more]
A0A6H5L4E1_9PHAE2.530e-4044.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 101..129
score: 8.169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1988contigEcto-sp13_S_contig1988:7848..10749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1988.6455.1mRNA_Ecto-sp13_S_contig1988.6455.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1988 7847..10749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1988.6455.1 ID=prot_Ecto-sp13_S_contig1988.6455.1|Name=mRNA_Ecto-sp13_S_contig1988.6455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
GDAVQILNREHEFCGFTGRVLHVDSRDPGREVAEVKIDDGTARVVFVRLL
SHEVGSEDIPVVNMLKINRQELRHHEPEELDLVRDALLAWADREREKWRP
QLAAVAIQRRIRGFIARRSTARRRYRHWTRERALRLTFLRALDVNNTATY
QAVRAAVKMRVIRATDVPTNMPWIPLVPPRLEEAFKRRRRRIILQEEIRT
RTAERMALIKKNPRKLQWKTPTHGPLIRPYHPYKEAWARLLSKVAHP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS