prot_Ecto-sp13_S_contig19877.6454.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19877.6454.1
Unique Nameprot_Ecto-sp13_S_contig19877.6454.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19877.6454.1 vs. uniprot
Match: A0A6H5KUY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY0_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 2.900e-73
Identity = 108/116 (93.10%), Postives = 110/116 (94.83%), Query Frame = 0 
Query:    1 MSTASLMLEKNASSDWVINRMKGINWGDKPNVGHASLFQFFPGFYAAMSVKESGKCYSEPDRNAEAVKVYKSFAVPAFLRWLVEEYDFANTPAWLTKDIMGRNSMGPKILLEASNK 116
            MSTASLMLEKNASSDWVINRMKG NWGDKPNVGHASLFQF PGFYA MSVKESGKCYSE DRNAEAVKVYKSFAVPAFLRWLVE+YDF  TPAWLTKDIMGRNSMGPKILLEA+NK
Sbjct:    1 MSTASLMLEKNASSDWVINRMKGTNWGDKPNVGHASLFQFLPGFYAGMSVKESGKCYSESDRNAEAVKVYKSFAVPAFLRWLVEKYDFTTTPAWLTKDIMGRNSMGPKILLEAANK 116
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BLAST of mRNA_Ecto-sp13_S_contig19877.6454.1 vs. uniprot
Match: A0A6H5LQJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQJ9_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 4.130e-70
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0 
Query:    1 MSTASLMLEKNASSDWVINRMKGINWGDKPNVGHASLFQFFPGFYAAMSVKESGKCYSEPDRNAEAVKVYKSFAVPAFLRWLVEEYDFANTPAWLTKDIMGRNSMGPKILLEASN 115
            MSTASLMLEKNASSDWVINRMKG NWGDKPNVGHASLFQF PGFY AMSVKESGKCYSEP+RNA AVKVYKSFAVPAFLRWLVEEYDF NTPAWLTKDIMG NS+GPK+L   +N
Sbjct:    1 MSTASLMLEKNASSDWVINRMKGTNWGDKPNVGHASLFQFLPGFYVAMSVKESGKCYSEPERNAGAVKVYKSFAVPAFLRWLVEEYDFTNTPAWLTKDIMGSNSIGPKVLRPGAN 115
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19877.6454.1 vs. uniprot
Match: A0A6H5KJ61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ61_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 6.910e-49
Identity = 77/83 (92.77%), Postives = 78/83 (93.98%), Query Frame = 0 
Query:    1 MSTASLMLEKNASSDWVINRMKGINWGDKPNVGHASLFQFFPGFYAAMSVKESGKCYSEPDRNAEAVKVYKSFAVPAFLRWLV 83
            MSTASLML+K ASSDWVINRMKG NWGDKPNVGHASL QF PGFY AMSVKESGKCYSEPDRNAEAVKVYKSFAVPAFLRWLV
Sbjct:    1 MSTASLMLDKEASSDWVINRMKGSNWGDKPNVGHASLSQFLPGFYVAMSVKESGKCYSEPDRNAEAVKVYKSFAVPAFLRWLV 83
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19877.6454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KUY0_9PHAE2.900e-7393.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LQJ9_9PHAE4.130e-7088.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ61_9PHAE6.910e-4992.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19877contigEcto-sp13_S_contig19877:514..2122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19877.6454.1mRNA_Ecto-sp13_S_contig19877.6454.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19877 487..2122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19877.6454.1 ID=prot_Ecto-sp13_S_contig19877.6454.1|Name=mRNA_Ecto-sp13_S_contig19877.6454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
MSTASLMLEKNASSDWVINRMKGINWGDKPNVGHASLFQFFPGFYAAMSV
KESGKCYSEPDRNAEAVKVYKSFAVPAFLRWLVEEYDFANTPAWLTKDIM
GRNSMGPKILLEASNKAHRENSTLKPRRRSGVQDSGMSC*
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