prot_Ecto-sp13_S_contig1986.6447.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1986.6447.1
Unique Nameprot_Ecto-sp13_S_contig1986.6447.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length775
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1986.6447.1 vs. uniprot
Match: D7G8U4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8U4_ECTSI)

HSP 1 Score: 766 bits (1978), Expect = 4.790e-265
Identity = 546/628 (86.94%), Postives = 554/628 (88.22%), Query Frame = 0 
Query:    1 MAAARGSRRELTDDVQGSSGGSGTEAAASPVEDAVAANVLEHYIRFRSKAEDASFKGWLELLELTMPKLQCRRGLREIDKATRLCYVMMLVGAGRDPPLASRAIAAMLVDHWCDKGPCAFLQKDAIRHATVVDGEYSEGLDKESIAQQLESGVEDALDGTGLEGLGVFADWRRDRDVLCPGGAASLREEIMNVAQRCRDASNDLDALSILEEYTEERRMGTFEDDFMAWGRVQLEKLPATLFDRAGFATSAPPSTPDAKKSSSAEGGGSAASCSRVDGSSGRLGRDKSTSVRDRSRAARRIITTISXXXXXXXXXXRRSGGVGIKPPSSA-PPGSPRVSPSTSRKALGADDHGSGSKATAGSGASVAVSGSREQPLSLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAVAAMEAARARPRRAGKRNQGELVEGDQVILEGKEFGGPTNWVPGVVTCNRKDGTYDVFLAGGEVALLVRRVELHYRHGGG-AKAGARSSTEARPDGCPAAVFGSADVIDVSPGPGAEEAGGGETGGGAGAGADRRDPGRLRLSKAYR 626
            MAAAR SRRELTDDVQGS GGSG EAAASPVED VAANVLEHYIRFRSKAEDASFKGWLELLELTMPKL+ RRGL EIDKATRLCYVMMLVG GRDPPLASRAIAAMLVDHWCDKGPCAFLQKDAIRHATVVDGEYSEGLDKESIAQQLESGVEDALDGTGLEGLGVFADWRRDRDVLCPGGAASLREEIM VAQRCRDA NDLDALSILEEYTEERRMGTFEDDFMAWGRVQL+KLPATLFDRAGF TSAPPSTPDAK           AS SRVDGSSGR GR K T VRDRSRAARR+IT   XXXXXXXXXX               PP SPRVSP+TSR+ALG+DDHGSGSKATAGSGASVAVSG+ EQPLSLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     AAK VAAMEAAR RPRRAGKRNQ ELVEGDQVILE KEFG PT WVPGVVTCNRKDGTYDVFLAGGEVA LVRRVELHYRHGGG A+AGARSSTEARPDGCP AVFGSADVIDVSPGPGAEEAGG            RR PGR RLSKAYR
Sbjct:    1 MAAARRSRRELTDDVQGSGGGSGAEAAASPVEDTVAANVLEHYIRFRSKAEDASFKGWLELLELTMPKLERRRGLLEIDKATRLCYVMMLVGTGRDPPLASRAIAAMLVDHWCDKGPCAFLQKDAIRHATVVDGEYSEGLDKESIAQQLESGVEDALDGTGLEGLGVFADWRRDRDVLCPGGAASLREEIMGVAQRCRDAPNDLDALSILEEYTEERRMGTFEDDFMAWGRVQLKKLPATLFDRAGFTTSAPPSTPDAKXXXXXXXXXXXASGSRVDGSSGRRGRGKGTPVRDRSRAARRVITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPDSPRVSPATSRRALGSDDHGSGSKATAGSGASVAVSGAMEQPLSLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEKEAAKVVAAMEAARPRPRRAGKRNQWELVEGDQVILEAKEFGRPTTWVPGVVTCNRKDGTYDVFLAGGEVARLVRRVELHYRHGGGGARAGARSSTEARPDGCPDAVFGSADVIDVSPGPGAEEAGGXXXXXXXXXXXXRRGPGRPRLSKAYR 628
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1986.6447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8U4_ECTSI4.790e-26586.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..203
NoneNo IPR availableCOILSCoilCoilcoord: 638..666
NoneNo IPR availableCOILSCoilCoilcoord: 470..490

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1986contigEcto-sp13_S_contig1986:9049..14681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1986.6447.1mRNA_Ecto-sp13_S_contig1986.6447.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1986 8447..14681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1986.6447.1 ID=prot_Ecto-sp13_S_contig1986.6447.1|Name=mRNA_Ecto-sp13_S_contig1986.6447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=775bp
MAAARGSRRELTDDVQGSSGGSGTEAAASPVEDAVAANVLEHYIRFRSKA
EDASFKGWLELLELTMPKLQCRRGLREIDKATRLCYVMMLVGAGRDPPLA
SRAIAAMLVDHWCDKGPCAFLQKDAIRHATVVDGEYSEGLDKESIAQQLE
SGVEDALDGTGLEGLGVFADWRRDRDVLCPGGAASLREEIMNVAQRCRDA
SNDLDALSILEEYTEERRMGTFEDDFMAWGRVQLEKLPATLFDRAGFATS
APPSTPDAKKSSSAEGGGSAASCSRVDGSSGRLGRDKSTSVRDRSRAARR
IITTISDSSSEDDSGSRRSGGVGIKPPSSAPPGSPRVSPSTSRKALGADD
HGSGSKATAGSGASVAVSGSREQPLSLDDDGSDDDASSSGNGPPPASGGK
PDSARERKDEHGRGGDPPCSSASDGSDDDELEDEYFPSDSSKRLRSERKK
QRRKRRKKRHLDSGGVVPAAASLEEEAAKAVAAMEAARARPRRAGKRNQG
ELVEGDQVILEGKEFGGPTNWVPGVVTCNRKDGTYDVFLAGGEVALLVRR
VELHYRHGGGAKAGARSSTEARPDGCPAAVFGSADVIDVSPGPGAEEAGG
GETGGGAGAGADRRDPGRLRLSKAYRRVGGKVDAARPSDDEEVREEEEQE
EGEEEEEEEEEEEEDHTGDTRRAARVSAHAGSGGGGGGGGGAAAAAAAAE
GLERWRITRRAETIATTARVEGAPARPRNGRRRRQPRRPRAAVQAAATAT
ARIREKAPLGFRTPTSEREYPSSI*
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