prot_Ecto-sp13_S_contig19851.6441.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19851.6441.1
Unique Nameprot_Ecto-sp13_S_contig19851.6441.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length384
Homology
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 5.380e-138
Identity = 299/382 (78.27%), Postives = 302/382 (79.06%), Query Frame = 0
Query:    1 ETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNQVGSSLATAAAAASAIPAREAKIASSAACARPAAAGHAPAPSLSDHPDXXXXXXXXXXXXXXXXXXXXXXXXXSKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTKTAEEEAEDARAAEQARVEIEKAAXXXXXXRERSRAALAAAEAEAKDAAEAKAAXAETTGGRASSSGLHTPPGPESEHHEEVRASSSAVSSSAVARELSFDSAGAGKDVRTRND 382
            ETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELN+VG +   A                                       XXXXXXXXXXXXXXXXXXXXXXXXX KASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKT TAEEEAEDARAAEQAR EI    XXXXX RERS                    XAET GGRASSSGL TPP PESEHHEEVRASSSAVSSSAVARELSFD  GAGKD    +D
Sbjct:  208 ETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTMTAEEEAEDARAAEQARAEIXXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLQTPPAPESEHHEEVRASSSAVSSSAVARELSFDGTGAGKDKAKIHD 589          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 3.830e-62
Identity = 108/149 (72.48%), Postives = 121/149 (81.21%), Query Frame = 0
Query:    3 RSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 151
            ++V++TTL W ETVT GTYDAPK+TA LYA DA+LWGT            VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP  VRVYGDFA QAG+YTF++QG DG+TVE RARFSFTFRR  P SPQPWTIVEHHSSSMPT+P  L+
Sbjct:  115 KAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK 251          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 2.480e-60
Identity = 107/154 (69.48%), Postives = 119/154 (77.27%), Query Frame = 0
Query:    3 RSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNQVG 156
            R+V+ETT+ W +TVT GTYDAPK+TA LYAPD  LWGT            VSE VRDTP+QIYAYFDYFARLPELKVVEYTP  VRVYGDFA QAG+YTFSWQ  DG+ VE RARFSFTFRR  P + +PWTIVEHHSSSMPT+P  L+   VG
Sbjct:   29 RAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGT------------VSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAVGVG 170          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 2.540e-60
Identity = 107/149 (71.81%), Postives = 120/149 (80.54%), Query Frame = 0
Query:    3 RSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 151
            ++V++TTL W ETVT GTYDAPK+TA LYA D +LWGT            VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP  VRVYGDFA QAG+YTF++QG DG+TVE RARFSFTFRR  P SPQPWTIVEHHSSSMPT+P  L+
Sbjct:  130 KAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK 266          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 6.970e-60
Identity = 107/149 (71.81%), Postives = 120/149 (80.54%), Query Frame = 0
Query:    3 RSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 151
            ++V++TTL W ETVT GTYDAPK+TA LYA DA+LWGT            VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP  VRVYGDFA QAG+YTF++QG DG TVE RARFSFTFRR  P SP+PWTIVEHHSSSMPT+P  L+
Sbjct:  168 QAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLK 304          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.190e-58
Identity = 106/154 (68.83%), Postives = 119/154 (77.27%), Query Frame = 0
Query:    3 RSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNQVG 156
            R+V+ETT+ W +TVT GTYDAPK+TA LYAPD  LWGT            VSE VRDTP+QIYAYFDYFARLPEL+VVEYTP  VRVYGDFA QAG+YTFSWQ  DG+ VE RARFSFTFRR  P + +PWTIVEHHSSSMPT+P  L+   VG
Sbjct:  174 RAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGT------------VSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAVGVG 315          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 9.790e-57
Identity = 102/148 (68.92%), Postives = 116/148 (78.38%), Query Frame = 0
Query:    4 SVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 151
            +V+ TT+ W +TVT GTYDAPK+TA LYA D +LWGT            VSE VRDTPEQIYAYFDYFARLPEL++VEYTP  VRVYGDFA QAG+YTF++QG DG+TVE RARFSFTFRR  P SP PWTIVEHHSSSMP +P  L+
Sbjct:  136 AVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLK 271          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 5.860e-55
Identity = 103/148 (69.59%), Postives = 115/148 (77.70%), Query Frame = 0
Query:    4 SVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 151
            +V+ TT+ W +TVT GTYDAPK+TA LYA D +LWGT            VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP  VRVYGDFA QAG+YTF++QG DG TVE RARFSFTFRR  P SP PWTIVEHHSSSMP +P  L+
Sbjct: 1261 AVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLK 1396          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.250e-52
Identity = 93/149 (62.42%), Postives = 110/149 (73.83%), Query Frame = 0
Query:    3 RSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 151
            + V +TT+ W E VT GT DAP++TA+LYA D +LWGT            VSE VRDTPE+IY YFDYFARLP L++ E+TP  +RVYGDFA +AG+YTF WQG DG   E RARFSFTFR + P SP  WTIVEHHSSSMPTSPL+L+
Sbjct:  105 KGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGT------------VSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFR-SDPESPTSWTIVEHHSSSMPTSPLQLK 240          
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Match: A0A6H5KT10_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT10_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 8.950e-44
Identity = 86/147 (58.50%), Postives = 104/147 (70.75%), Query Frame = 0
Query:    4 SVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGS---TVEMRARFSFTFR--RAGPSSPQPWTIVEHHSSSMPT 145
            +V  TT  W ETVT GT+DAP++ A+LYAPD +LWGTE            SE VR+TPEQIYAY+DYFARLPEL++VE+T AP RV GDFA+Q+G++TFSW+G  G    TVE+RARFS TFR  R     P  W IVEH + SMPT
Sbjct:  194 AVELTTKLWAETVTLGTFDAPRKAADLYAPDGVLWGTEAFAFDDPLWEYASELVRNTPEQIYAYYDYFARLPELRLVEFTAAPARVRGDFASQSGTHTFSWRGAGGQEEYTVEVRARFSLTFRKDRCSCGGPSEWAIVEHCTFSMPT 340          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19851.6441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5JTS4_9PHAE5.380e-13878.27PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JT29_9PHAE3.830e-6272.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX02_9PHAE2.480e-6069.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF8_ECTSI2.540e-6071.81Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5K0Z5_9PHAE6.970e-6071.81PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FUF9_ECTSI1.190e-5868.83Similar to Uncharacterized protein conserved in ba... [more]
D7FN21_ECTSI9.790e-5768.92Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE5.860e-5569.59Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JSB2_9PHAE1.250e-5262.42DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5KT10_9PHAE8.950e-4458.50DUF4440 domain-containing protein n=1 Tax=Ectocarp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..326
NoneNo IPR availableGENE3D3.10.450.50coord: 1..155
e-value: 4.6E-33
score: 116.2
IPR027843Domain of unknown function DUF4440PFAMPF14534DUF4440coord: 5..135
e-value: 9.0E-24
score: 83.9
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 26..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19851contigEcto-sp13_S_contig19851:603..2936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19851.6441.1mRNA_Ecto-sp13_S_contig19851.6441.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19851 603..2936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19851.6441.1 ID=prot_Ecto-sp13_S_contig19851.6441.1|Name=mRNA_Ecto-sp13_S_contig19851.6441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=384bp
ETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGPDDDLW
GTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSY
TFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLEL
ELNQVGSSLATAAAAASAIPAREAKIASSAACARPAAAGHAPAPSLSDHP
DAEEPEPEASISASAASAPEPAPAPASKASRSPIWSGLFRAFTSSAASAA
SSDQPAAASVASAPEAKTKTAEEEAEDARAAEQARVEIEKAAEETRAARE
RSRAALAAAEAEAKDAAEAKAAAAETTGGRASSSGLHTPPGPESEHHEEV
RASSSAVSSSAVARELSFDSAGAGKDVRTRNDH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027843DUF4440
IPR032710NTF2-like_dom_sf