prot_Ecto-sp13_S_contig1985.6439.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1985.6439.1
Unique Nameprot_Ecto-sp13_S_contig1985.6439.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length250
Homology
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: D7FY69_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY69_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 9.160e-124
Identity = 177/191 (92.67%), Postives = 180/191 (94.24%), Query Frame = 0
Query:   56 SRMRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            SR+RPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGR NGIP+VSFAVSPTASLDDLCTTHD+ YVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCA GELRDR PG R   PSLFSGHIAGGTHHAF DRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQ  G
Sbjct:    3 SRLRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRVNGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGARRTPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNG 193          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: A0A7S4B912_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B912_CHRCT)

HSP 1 Score: 223 bits (568), Expect = 3.850e-68
Identity = 121/211 (57.35%), Postives = 141/211 (66.82%), Query Frame = 0
Query:   38 YRASPVGLTTAAALVSTQSRMRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPS--VSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            + A+  G+ +      +     P +PLFYND+Y V LP GHRFPM KYRLVR GLQ EL       PS   +F  SP A++ DL T HD  YVERY  G FT +ENR VGFPWS  SVKRSLSS GGTVAA HAVC      +R PG        F+GH+AGGTHHAF DRGEGFCVF+DIAVAA VALRDY E+++++LIVD DVHQ  G
Sbjct:   12 FNAARAGIRSCNLRSYSMMAQYPPVPLFYNDLYEVPLPPGHRFPMAKYRLVRLGLQRELE------PSNLATFLPSPLAAVSDLTTCHDATYVERYVTGTFTPQENRRVGFPWSIESVKRSLSSTGGTVAATHAVC------NRTPGA-----PRFAGHLAGGTHHAFADRGEGFCVFNDIAVAACVALRDYKESVQRVLIVDLDVHQGNG 205          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: A0A7S4B9B1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B9B1_CHRCT)

HSP 1 Score: 223 bits (568), Expect = 4.570e-68
Identity = 121/211 (57.35%), Postives = 141/211 (66.82%), Query Frame = 0
Query:   38 YRASPVGLTTAAALVSTQSRMRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPS--VSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            + A+  G+ +      +     P +PLFYND+Y V LP GHRFPM KYRLVR GLQ EL       PS   +F  SP A++ DL T HD  YVERY  G FT +ENR VGFPWS  SVKRSLSS GGTVAA HAVC      +R PG        F+GH+AGGTHHAF DRGEGFCVF+DIAVAA VALRDY E+++++LIVD DVHQ  G
Sbjct:   12 FNAARAGIRSCNLRSYSMMAQYPPVPLFYNDLYEVPLPPGHRFPMAKYRLVRLGLQRELE------PSNLATFLPSPLAAVSDLTTCHDATYVERYVTGTFTPQENRRVGFPWSIESVKRSLSSTGGTVAATHAVC------NRTPGA-----PRFAGHLAGGTHHAFADRGEGFCVFNDIAVAACVALRDYKESVQRVLIVDLDVHQGNG 205          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: A0A7S1IVC4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IVC4_9EUGL)

HSP 1 Score: 212 bits (540), Expect = 3.740e-64
Identity = 111/182 (60.99%), Postives = 123/182 (67.58%), Query Frame = 0
Query:   65 FYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            +YNDVY+V LP GHRFPMEKYR+VRE LQ  L   E       F VSP A+  DLC  HD  YV RY  G FT+ ENR VGFPWS  SV RSLSSVGGTVAA H VC G               + F+ H+AGGTHHAF D GEGFC+FSDIAVAA VALRDYP+ I++ILIVD DVHQ  G
Sbjct:   25 YYNDVYKVPLPQGHRFPMEKYRMVRERLQCLLPQGE-----ALFEVSPLATTRDLCLVHDHTYVNRYRTGAFTDAENRKVGFPWSINSVNRSLSSVGGTVAATHMVCTG--------------KAFFAAHLAGGTHHAFRDHGEGFCIFSDIAVAATVALRDYPKIIKKILIVDLDVHQGNG 187          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: R1CTH7_EMIHU (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CTH7_EMIHU)

HSP 1 Score: 208 bits (530), Expect = 3.910e-64
Identity = 113/206 (54.85%), Postives = 136/206 (66.02%), Query Frame = 0
Query:   39 RASPVGLTTAAALVSTQSRMRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQV 244
            R +P+ L  A+  V T   ++P LPL+YND Y+V LP    FPMEKYR +RE LQ EL          +F  SP AS++DL T HD +YV RY     +++ENR +GFPWSEA   R+LSS GGTVAAMHAVC  G  R             F+GHIAGGTHHAF DRGEG+CVF+DIAVAA  ALRDYP  IR++L+VD DVHQV
Sbjct:    2 RNAPLRLQLASRAVCTL--VQPPLPLWYNDHYQVSLPSTSSFPMEKYRYIREALQREL----EAAGKATFHESPLASVEDLTTVHDGEYVRRYLANELSHKENRRIGFPWSEAGKLRALSSTGGTVAAMHAVCRPGGAR-------------FAGHIAGGTHHAFADRGEGYCVFNDIAVAAACALRDYP-AIRRVLLVDLDVHQV 187          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: A0A835Z933_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z933_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.890e-62
Identity = 111/198 (56.06%), Postives = 125/198 (63.13%), Query Frame = 0
Query:   68 DVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPS-------------------VSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            DVY V LP  HRFPM KYR+VRE +Q EL G                           +F+VSP AS DDL TTH  DYV R   G  T +E+R VGFPWSE  V R+LSS+GGTVAA HAVC     RD      G    LF+GH+AGGTHHAF DRGEGFCVFSDIAVAANVALRD+ E +R+ILI+D DVHQ  G
Sbjct:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDA-----GAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNG 193          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: F0YDD4_AURAN (Uncharacterized protein HDA n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDD4_AURAN)

HSP 1 Score: 201 bits (512), Expect = 5.830e-60
Identity = 113/205 (55.12%), Postives = 131/205 (63.90%), Query Frame = 0
Query:   47 TAAALVSTQSRMRPELPLFY-NDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVC----AGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            T A L   ++R     P+FY NDV+   LP+ HRFPM KYRLVRE LQ E      G+ + +F  SP ASL DL TTH R Y ER+  G+ T  ENR +GFPWS A V R+LSS GGTVAA  AV     AGG LR              +GH+AGGTHHAF DRGEGFCVFSDIAVAANV LRDY + + +IL+VD DVHQ  G
Sbjct:    5 TCALLAVRRARGLATRPVFYYNDVWEFPLPENHRFPMAKYRLVREALQAE------GV-AAAFEPSPLASLTDLTTTHCRGYCERFVGGKLTAAENRNIGFPWSPAGVNRALSSTGGTVAAARAVADARRAGGGLR-------------VAGHVAGGTHHAFFDRGEGFCVFSDIAVAANVLLRDYGDVVEKILVVDVDVHQGNG 189          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: L1JLJ8_GUITC (Histone deacetylase HstD n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JLJ8_GUITC)

HSP 1 Score: 201 bits (511), Expect = 3.290e-59
Identity = 105/186 (56.45%), Postives = 123/186 (66.13%), Query Frame = 0
Query:   61 ELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRENGIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            +L LFYND+Y V+LP GHRFPM KYR VRE +           P++    SP A  DD+ TTH  +Y+ R+     T++ENR +GFPWS   VKR+LSSVGGTVAAMH+                 T    +GHIAGGTHHAF DRGEGFCVFSDIAVAANVALRDY E I++ILIVDCDVHQ  G
Sbjct:  101 QLRLFYNDIYHVELPQGHRFPMHKYRAVRERIH------HANKPNIVLQPSPIARTDDIRTTHCHEYLRRFLCNMLTDKENRNIGFPWSPQGVKRTLSSVGGTVAAMHS----------------STGHKLAGHIAGGTHHAFRDRGEGFCVFSDIAVAANVALRDY-EHIKKILIVDCDVHQGNG 263          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: A0A7S1D7Q2_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7Q2_CYCTE)

HSP 1 Score: 195 bits (496), Expect = 1.080e-57
Identity = 104/193 (53.89%), Postives = 126/193 (65.28%), Query Frame = 0
Query:   59 RPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGREN-----GIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            RP  P++YNDVY V LP  HRFPM+KYR  RE +Q  ++         G+ S    VSP A+ D++ TTH  DY+ R+  G  T+ E R VGFPWSEA VKR+LSS GGTVAA  AVC              +T  ++S H+AGGTHHAF DRGEGFCVFSDIAVAANV L+ YP  +++ILIVD DVHQ  G
Sbjct:    5 RPYFPIYYNDVYEVILPPHHRFPMDKYRQTRELIQQYMMDAMTTATTAGVVS-DLRVSPLATWDEIITTHSPDYLYRFVTGDQTDEELRNVGFPWSEAGVKRALSSTGGTVAAACAVCDA-----LLQSGDDRTHPVWSAHVAGGTHHAFFDRGEGFCVFSDIAVAANVVLQRYPSLVKKILIVDLDVHQGNG 191          
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Match: B7FP07_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP07_PHATC)

HSP 1 Score: 192 bits (487), Expect = 9.330e-57
Identity = 102/187 (54.55%), Postives = 126/187 (67.38%), Query Frame = 0
Query:   63 PLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGR---ENGIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTHHAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRG 246
            P++YNDVY V LP  HRFPMEKY  VR+ +Q  L      E G+ +  F VSP +S+D+L TTHD  YV+R+  G    RE R VGFPWS+++V RSLSS GGTVAA  AV     LRD + G+       +  H+AGGTHHAF DRGEGFCVFSD+AVAANV ++ YP  +R+IL +D DVHQ  G
Sbjct:    1 PIYYNDVYEVKLPKNHRFPMEKYGRVRQLVQQWLQNLPVDEQGVVNYEFRVSPLSSIDELTTTHDPAYVQRFLTGDQDERELRNVGFPWSQSNVDRSLSSTGGTVAAACAVVQA-RLRDPY-GLH------WGAHVAGGTHHAFYDRGEGFCVFSDMAVAANVVMKRYPGVVRRILFLDLDVHQGNG 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1985.6439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY69_ECTSI9.160e-12492.67Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A7S4B912_CHRCT3.850e-6857.35Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4B9B1_CHRCT4.570e-6857.35Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1IVC4_9EUGL3.740e-6460.99Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
R1CTH7_EMIHU3.910e-6454.85Hist_deacetyl domain-containing protein (Fragment)... [more]
A0A835Z933_9STRA2.890e-6256.06Hist_deacetyl domain-containing protein n=1 Tax=Tr... [more]
F0YDD4_AURAN5.830e-6055.12Uncharacterized protein HDA n=1 Tax=Aureococcus an... [more]
L1JLJ8_GUITC3.290e-5956.45Histone deacetylase HstD n=1 Tax=Guillardia theta ... [more]
A0A7S1D7Q2_CYCTE1.080e-5753.89Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
B7FP07_PHATC9.330e-5754.55Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase familyPRINTSPR01270HDASUPERcoord: 197..220
score: 43.91
coord: 233..248
score: 39.78
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 108..247
e-value: 1.6E-16
score: 60.7
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 63..248
e-value: 9.8E-25
score: 89.3
NoneNo IPR availablePANTHERPTHR43497:SF4coord: 58..247
NoneNo IPR availablePANTHERPTHR43497FAMILY NOT NAMEDcoord: 58..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 60..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1985contigEcto-sp13_S_contig1985:202..3807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1985.6439.1mRNA_Ecto-sp13_S_contig1985.6439.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1985 202..3807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1985.6439.1 ID=prot_Ecto-sp13_S_contig1985.6439.1|Name=mRNA_Ecto-sp13_S_contig1985.6439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp
MRPSSPAILNMISTLLPCARQQAAARSIAVPNGRLVAYRASPVGLTTAAA
LVSTQSRMRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRE
NGIPSVSFAVSPTASLDDLCTTHDRDYVERYFEGRFTNRENRTVGFPWSE
ASVKRSLSSVGGTVAAMHAVCAGGELRDRFPGVRGKTPSLFSGHIAGGTH
HAFLDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQVRGTLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000286His_deacetylse
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf