prot_Ecto-sp13_S_contig1984.6434.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1984.6434.1
Unique Nameprot_Ecto-sp13_S_contig1984.6434.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: A0A6H5KEX7_9PHAE (Ribosomal_S13_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX7_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 3.180e-98
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA
Sbjct:   38 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 188          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: A0A6H5KYF2_9PHAE (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF2_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.560e-92
Identity = 142/151 (94.04%), Postives = 147/151 (97.35%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMHSGGKGISKSSLPY+R  P WLK+SAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQV AITG+KILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKY+S+SASALVA
Sbjct:   21 MGRMHSGGKGISKSSLPYRRRVPLWLKVSAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 171          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: D7FP13_ECTSI (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP13_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 4.010e-90
Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 0
Query:    6 SGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            SGGKGISKSSLPY+RS PSWLK+SAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQV AITG+KILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKY+S+SASALVA
Sbjct:   24 SGGKGISKSSLPYRRSAPSWLKVSAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 169          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: A0A7S2V1V2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1V2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.710e-87
Identity = 131/151 (86.75%), Postives = 145/151 (96.03%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMHS GKG++ S+LPYKR+PPSWLKISA++V +HVCKLAKKGL+PSQIGVILRDSNGIAQVR++TGSK+LR+LK NGLA EIPEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRLARYYRTNRKLA NWKYESS+ASALVA
Sbjct:    1 MGRMHSRGKGMASSALPYKRTPPSWLKISAKDVEDHVCKLAKKGLSPSQIGVILRDSNGIAQVRSVTGSKVLRLLKKNGLAPEIPEDLYMLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTNRKLAPNWKYESSTASALVA 151          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: A0A6V1RUJ0_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUJ0_HETAK)

HSP 1 Score: 253 bits (645), Expect = 2.720e-84
Identity = 126/151 (83.44%), Postives = 141/151 (93.38%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMH+ GKG+SKSS PYKRSPPSWLKI+A++V  H+CKLAKKGLTPSQIGV+LRDSNGIAQV+++TGSKILR+LK NGLA EIPEDLYMLIKKAV VRKHLERNR+D D+KFRLILIESRIHRLARYYR NRKLA+NWKYES +ASALVA
Sbjct:    1 MGRMHTSGKGMSKSSRPYKRSPPSWLKITARDVETHICKLAKKGLTPSQIGVMLRDSNGIAQVKSVTGSKILRILKKNGLAPEIPEDLYMLIKKAVQVRKHLERNRKDHDAKFRLILIESRIHRLARYYRLNRKLASNWKYESDTASALVA 151          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: H3G9F0_PHYRM (Ribosomal_S13_N domain-containing protein n=30 Tax=Oomycota TaxID=4762 RepID=H3G9F0_PHYRM)

HSP 1 Score: 249 bits (637), Expect = 4.510e-83
Identity = 122/151 (80.79%), Postives = 142/151 (94.04%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMHS GKG+SKS+ PYKRSPPSWLK+++++V +H+CK AKKGLTPSQIGVILRDS+GIAQV+++TGSK+LR+LK NGLA E+PEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRLARYYR NRKL+ NWKYES++AS LVA
Sbjct:    1 MGRMHSHGKGMSKSARPYKRSPPSWLKVTSEDVEDHICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKVLRLLKKNGLAPELPEDLYMLIKKAVAVRKHLERNRQDKDSKFRLILIESRIHRLARYYRKNRKLSPNWKYESATASTLVA 151          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: A0A6U5KTU7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KTU7_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.140e-81
Identity = 120/151 (79.47%), Postives = 139/151 (92.05%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMH+ GKGISKS+LPYKRSPPSWLKI++ +V EH+CKLAKKGLTPSQIGV+LRD +GIAQVR++TGSKI+R+LK  GLA EIPEDLYMLIKKAV+VRKHLE+NR+DKDSKFRLILIESRIHRLARYYRT RKL  NW+Y S++AS +VA
Sbjct:    1 MGRMHAPGKGISKSALPYKRSPPSWLKITSSDVEEHICKLAKKGLTPSQIGVVLRDQHGIAQVRSVTGSKIVRILKVQGLAPEIPEDLYMLIKKAVSVRKHLEKNRKDKDSKFRLILIESRIHRLARYYRTTRKLPPNWRYASATASTMVA 151          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: A0A7S0SUB1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUB1_9STRA)

HSP 1 Score: 244 bits (623), Expect = 6.130e-81
Identity = 125/151 (82.78%), Postives = 139/151 (92.05%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMHSGGKGISKSSLPYKRSPPSWLKISA +V + V KLAKKGLTPSQIGVILRD +G+AQV+++TG+K +R+LK  GLA  IPEDLYMLIKKAVAVRKHLERN++DKDSKFRLILIESRIHRLARYYRT RKL ANWKYES++ASALVA
Sbjct:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAAQVEDLVIKLAKKGLTPSQIGVILRDQHGVAQVKSVTGNKTVRILKKAGLAPTIPEDLYMLIKKAVAVRKHLERNKKDKDSKFRLILIESRIHRLARYYRTARKLEANWKYESATASALVA 151          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: B7FNY4_PHATC (Predicted protein n=3 Tax=Naviculales TaxID=38748 RepID=B7FNY4_PHATC)

HSP 1 Score: 243 bits (620), Expect = 1.760e-80
Identity = 119/150 (79.33%), Postives = 138/150 (92.00%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALV 150
            MGRMH+ GKGIS+ +LP+KR+PPSWLK+S+ +V + VCKLAKKGLTPSQIGVILRDSNGIAQV+ +TG K++R+LKANGLA EIPEDLYMLIKKAV VRKHLERNR+DKDSKFRLILIESRIHRLARYYRT RKL +NWKYES++AS +V
Sbjct:    1 MGRMHAPGKGISRRALPFKRTPPSWLKVSSADVEDQVCKLAKKGLTPSQIGVILRDSNGIAQVKFVTGQKVVRILKANGLAPEIPEDLYMLIKKAVQVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTTRKLPSNWKYESATASTIV 150          
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Match: A0A6A4Z540_9STRA (Ribosomal_S13_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z540_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.810e-80
Identity = 123/165 (74.55%), Postives = 143/165 (86.67%), Query Frame = 0
Query:    1 MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQIGVILRDSNGIAQVRAITGSKILRVLKANG--------------LAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 151
            MGRMHSGGKGISKS+ PYKR+PPSWLK+++++V +HVCK AKKGLTPSQIGVILRDS+GIAQV+++TGSK+LR+LK NG              LA E+PEDLYMLIKKAVAVRKHL+RNR+DKDSKFRLILIESRIHRLARYYR NRKL+ NWKYES++AS LVA
Sbjct:    1 MGRMHSGGKGISKSARPYKRTPPSWLKVTSEDVEDHVCKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKVLRILKKNGTPVAAFPRLYHVLGLAPELPEDLYMLIKKAVAVRKHLDRNRQDKDSKFRLILIESRIHRLARYYRQNRKLSPNWKYESATASTLVA 165          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1984.6434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEX7_9PHAE3.180e-98100.00Ribosomal_S13_N domain-containing protein n=2 Tax=... [more]
A0A6H5KYF2_9PHAE1.560e-9294.04Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
D7FP13_ECTSI4.010e-9095.21Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
A0A7S2V1V2_9STRA1.710e-8786.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1RUJ0_HETAK2.720e-8483.44Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
H3G9F0_PHYRM4.510e-8380.79Ribosomal_S13_N domain-containing protein n=30 Tax... [more]
A0A6U5KTU7_9STRA2.140e-8179.47Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0SUB1_9STRA6.130e-8182.78Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
B7FNY4_PHATC1.760e-8079.33Predicted protein n=3 Tax=Naviculales TaxID=38748 ... [more]
A0A6A4Z540_9STRA2.810e-8074.55Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 70..149
e-value: 3.9E-11
score: 53.0
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 76..144
e-value: 1.1E-13
score: 51.1
IPR000589Ribosomal protein S15PROSITEPS00362RIBOSOMAL_S15coord: 98..128
IPR012606Ribosomal protein S13/S15, N-terminalSMARTSM01386Ribosomal_S13_N_2coord: 1..60
e-value: 7.0E-37
score: 138.5
IPR012606Ribosomal protein S13/S15, N-terminalPFAMPF08069Ribosomal_S13_Ncoord: 1..60
e-value: 1.5E-30
score: 105.0
NoneNo IPR availableGENE3D1.10.8.1030coord: 35..82
e-value: 2.2E-26
score: 93.3
NoneNo IPR availableGENE3D1.10.287.10coord: 83..151
e-value: 4.6E-35
score: 121.4
IPR023029Ribosomal protein S15PPANTHERPTHR11885RIBOSOMAL PROTEIN S15P/S13Ecoord: 1..151
IPR023029Ribosomal protein S15PHAMAPMF_01343_ARibosomal_S15_Acoord: 3..149
score: 29.93
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 66..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1984contigEcto-sp13_S_contig1984:7088..9327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1984.6434.1mRNA_Ecto-sp13_S_contig1984.6434.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1984 6212..10121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1984.6434.1 ID=prot_Ecto-sp13_S_contig1984.6434.1|Name=mRNA_Ecto-sp13_S_contig1984.6434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
MGRMHSGGKGISKSSLPYKRSPPSWLKISAQEVTEHVCKLAKKGLTPSQI
GVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRK
HLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALV
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR012606Ribosomal_S13/S15_N
IPR023029Ribosomal_S15P
IPR009068S15_NS1_RNA-bd