prot_Ecto-sp13_S_contig19837.6431.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19837.6431.1
Unique Nameprot_Ecto-sp13_S_contig19837.6431.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 4.060e-52
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   32 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.900e-50
Identity = 80/85 (94.12%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   33 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.430e-48
Identity = 77/85 (90.59%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   34 YIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: A0A8J5MIZ0_9STRA (Histone domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MIZ0_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.080e-48
Identity = 76/85 (89.41%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVL+QVHPDTGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   37 YIYKVLRQVHPDTGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSA 121          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.300e-48
Identity = 80/85 (94.12%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  166 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 157 bits (397), Expect = 4.240e-48
Identity = 76/85 (89.41%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   36 YIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: M4B6M3_HYAAE (Histone H2B n=49 Tax=Oomycota TaxID=4762 RepID=M4B6M3_HYAAE)

HSP 1 Score: 156 bits (394), Expect = 1.110e-47
Identity = 75/85 (88.24%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVL+QVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   33 YIYKVLRQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSA 117          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: A0A7S2P1D6_9STRA (Histone H2B n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P1D6_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.680e-47
Identity = 76/85 (89.41%), Postives = 83/85 (97.65%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   69 YIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 153          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 155 bits (392), Expect = 2.030e-47
Identity = 75/85 (88.24%), Postives = 83/85 (97.65%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   30 YIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114          
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Match: K0TPB8_THAOC (Histone H2B n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPB8_THAOC)

HSP 1 Score: 157 bits (396), Expect = 2.290e-47
Identity = 76/85 (89.41%), Postives = 83/85 (97.65%), Query Frame = 0
Query:    1 YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 85
            YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   79 YIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19837.6431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI8_ECTSI4.060e-52100.00Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A836CJ22_9STRA5.900e-5094.12Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A485K2U0_9STRA1.430e-4890.59Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep... [more]
A0A8J5MIZ0_9STRA3.080e-4889.41Histone domain-containing protein n=1 Tax=Phytopht... [more]
A0A836CJT3_9STRA3.300e-4894.12Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
B8BX20_THAPS4.240e-4889.41Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
M4B6M3_HYAAE1.110e-4788.24Histone H2B n=49 Tax=Oomycota TaxID=4762 RepID=M4B... [more]
A0A7S2P1D6_9STRA1.680e-4789.41Histone H2B n=2 Tax=Skeletonema marinoi TaxID=2675... [more]
H2B_OLILU2.030e-4788.24Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830... [more]
K0TPB8_THAOC2.290e-4789.41Histone H2B n=1 Tax=Thalassiosira oceanica TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 39..56
score: 56.83
coord: 17..37
score: 67.66
coord: 69..82
score: 92.65
coord: 56..69
score: 90.61
IPR000558Histone H2BSMARTSM00427h2b3coord: 1..84
e-value: 1.4E-58
score: 210.6
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..85
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 53..75
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..85
e-value: 1.5E-48
score: 165.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 1..85
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..61
e-value: 8.7E-14
score: 52.0
NoneNo IPR availablePANTHERPTHR23428:SF230coord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19837contigEcto-sp13_S_contig19837:4..261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19837.6431.1mRNA_Ecto-sp13_S_contig19837.6431.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19837 4..261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19837.6431.1 ID=prot_Ecto-sp13_S_contig19837.6431.1|Name=mRNA_Ecto-sp13_S_contig19837.6431.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
YIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATL
SSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3