prot_Ecto-sp13_S_contig19835.6429.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19835.6429.1
Unique Nameprot_Ecto-sp13_S_contig19835.6429.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length287
Homology
BLAST of mRNA_Ecto-sp13_S_contig19835.6429.1 vs. uniprot
Match: A0A6H5L8E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E9_9PHAE)

HSP 1 Score: 469 bits (1207), Expect = 5.050e-165
Identity = 247/316 (78.16%), Postives = 259/316 (81.96%), Query Frame = 0
Query:    1 MSVTFAHEGDDACWACIDPSFSYFLVSGSLAPVEIIPNRLSASLQTPTPLRYAGSSKSLKHTLSVELTVSEGELRQDRCKHSARLEAQENNAEKGAVGGVHHPVVYGVQIPGTARLPVDKSSSTAGSTWSAVAPRKDGGLMSDHGGGGGSDIESTPGGGICSVLKATTLCEINASDVDFSSNEAGETPLLLPGQSLDCYLLLHCVKVVGPESDPDKPVSPEVIPAATERAAGTTRWKLDARQGSCIGRV-----------------------------FGNGFSAAALEQVALLMEQREEPAAAVVRRKGSAVDKV 287
            MSVTFAHEG DACWAC DPSFSYFLVSGSLAPV+IIPNRLSASLQ PTPLRYAG+S SLKHTL VELT SE +LRQDRC+HSARLEA E+NAEKG  GGVHHP VYGVQIPGTAR P DKSSSTAGSTWS VAPRKDGGL SDHGGGGGSDIESTPGGGI SVLKAT   EINAS+VDFS+NE  ETPLLLPGQSLDCYLLLH VKV+GPE DPDK VSPEV+PAA ER  GTTRWKLDARQGSCIG+V                             FG GFSAAALEQVALLME+R+EPAAAVVRRKGSAVDKV
Sbjct:    1 MSVTFAHEGYDACWACNDPSFSYFLVSGSLAPVKIIPNRLSASLQNPTPLRYAGTSNSLKHTLGVELTASEAQLRQDRCEHSARLEAHESNAEKGTAGGVHHPAVYGVQIPGTARSPGDKSSSTAGSTWSPVAPRKDGGLTSDHGGGGGSDIESTPGGGIFSVLKATKPSEINASEVDFSTNEGRETPLLLPGQSLDCYLLLHRVKVIGPERDPDKAVSPEVVPAAAERVTGTTRWKLDARQGSCIGKVSRRFLRELEREEAKHETEVKVSFLRQTEVFGKGFSAAALEQVALLMERRKEPAAAVVRRKGSAVDKV 316          
BLAST of mRNA_Ecto-sp13_S_contig19835.6429.1 vs. uniprot
Match: D7G3J9_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J9_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 6.410e-144
Identity = 222/287 (77.35%), Postives = 235/287 (81.88%), Query Frame = 0
Query:    1 MSVTFAHEGDDACWACIDPSFSYFLVSGSLAPVEIIPNRLSASLQTPTPLRYAGSSKSLKHTLSVELTVSEGELRQDRCKHSARLEAQENNAEKGAVGGVHHPVVYGVQIPGTARLPVDKSSSTAGSTWSAVAPRKDGGLMSDHGGGGGSDIESTPGGGICSVLKATTLCEINASDVDFSSNEAGETPLLLPGQSLDCYLLLHCVKVVGPESDPDKPVSPEVIPAATERAAGTTRWKLDARQGSCIGRVFGNGFSAAALEQVALLMEQREEPAAAVVRRKGSAVDKV 287
            MSVTFAHEGDDA WAC DPSFSYFLVSGSLAP+EIIPNRLSA+L TPTPL Y G+S SLKHTLSVELT SE +LRQDR +HSARLEAQE+  EKG  GGVHHP VYGVQIPGTAR   DKS STAGSTWS VAPRKDGGL S+H                    +ATT  E+NASDVDFSSNE  ET  LLPGQSLDCYLLLH VK+V PESDPDKPVS EV+PAA ERA GTTRWKL+ARQGSCIGRVFG GFSAAALEQVALLME+REEPAAAVVRRKGSAVDKV
Sbjct:    1 MSVTFAHEGDDASWACTDPSFSYFLVSGSLAPMEIIPNRLSATLLTPTPLHYVGTSDSLKHTLSVELTASEAQLRQDRGEHSARLEAQESKPEKGTAGGVHHPAVYGVQIPGTARSSGDKSRSTAGSTWSPVAPRKDGGLTSEHXXXXXXXXXXXXXXXXXXXXRATTPSEVNASDVDFSSNEGEETLPLLPGQSLDCYLLLHRVKIVDPESDPDKPVSLEVVPAAVERATGTTRWKLEARQGSCIGRVFGKGFSAAALEQVALLMERREEPAAAVVRRKGSAVDKV 287          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19835.6429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8E9_9PHAE5.050e-16578.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3J9_ECTSI6.410e-14477.35Cyclic nucleotide-binding domain-containing protei... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19835contigEcto-sp13_S_contig19835:439..1908 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19835.6429.1mRNA_Ecto-sp13_S_contig19835.6429.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19835 439..1908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19835.6429.1 ID=prot_Ecto-sp13_S_contig19835.6429.1|Name=mRNA_Ecto-sp13_S_contig19835.6429.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
MSVTFAHEGDDACWACIDPSFSYFLVSGSLAPVEIIPNRLSASLQTPTPL
RYAGSSKSLKHTLSVELTVSEGELRQDRCKHSARLEAQENNAEKGAVGGV
HHPVVYGVQIPGTARLPVDKSSSTAGSTWSAVAPRKDGGLMSDHGGGGGS
DIESTPGGGICSVLKATTLCEINASDVDFSSNEAGETPLLLPGQSLDCYL
LLHCVKVVGPESDPDKPVSPEVIPAATERAAGTTRWKLDARQGSCIGRVF
GNGFSAAALEQVALLMEQREEPAAAVVRRKGSAVDKV
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