prot_Ecto-sp13_S_contig1983.6428.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1983.6428.1
Unique Nameprot_Ecto-sp13_S_contig1983.6428.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: D7FNK2_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK2_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.080e-29
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0
Query:   10 RYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASMLST 66
            RYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGL+DPQVRGGDRLALEKRASMLST
Sbjct:  582 RYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLKDPQVRGGDRLALEKRASMLST 638          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: A0A6H5L3R1_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3R1_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.100e-28
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0
Query:   10 RYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASMLST 66
            RYTPHRRGRWWNRLSLDLAHAKRL CALWASQEGLRDPQVRGGDRLALEKRASMLST
Sbjct:  905 RYTPHRRGRWWNRLSLDLAHAKRLLCALWASQEGLRDPQVRGGDRLALEKRASMLST 961          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: D3ZVU2_RAT (Fanconi-associated nuclease n=5 Tax=Tetrapoda TaxID=32523 RepID=D3ZVU2_RAT)

HSP 1 Score: 63.9 bits (154), Expect = 5.040e-10
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    4 SIFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASML--STRCRSCCRLFTFGP 79
            ++  ++ Y P  RGRWW+RL+L+L  H KRL  A+W  +EGL DPQVR G RL+L +RA  L  S  C+    LF+  P
Sbjct:  695 NLLAQKVYCPDSRGRWWDRLALNLHQHLKRLEEAIWCIKEGLADPQVRTGHRLSLYQRAVRLRESPSCKKYRHLFSQLP 773          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: A0A2Y9KBE3_ENHLU (Fanconi-associated nuclease n=8 Tax=Mustelidae TaxID=9655 RepID=A0A2Y9KBE3_ENHLU)

HSP 1 Score: 62.4 bits (150), Expect = 1.760e-9
Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    4 SIFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASML--STRCRSCCRLFTFGP 79
            S+ ++R Y P  RGRWW+RL+L+L  H KRL  A+    EGL DP+VR G RL+L +RA  L  ST CR    LF   P
Sbjct:  700 SLLSQRVYCPDSRGRWWDRLALNLHQHLKRLEPAVRCITEGLADPEVRTGHRLSLYQRALRLRESTSCRKYRHLFHHLP 778          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: UPI00032B258E (fanconi-associated nuclease 1 n=2 Tax=Ochotona TaxID=9977 RepID=UPI00032B258E)

HSP 1 Score: 61.2 bits (147), Expect = 4.470e-9
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    4 SIFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASMLSTRCRSCCRLFTFGPRGL 82
            S+ +++ Y P  RGRWW+RL+L+L  H KRL  A+    EGL DP+VR G RLAL +RA  L  R  + C+ F    RGL
Sbjct:  606 SLLSQKIYCPDSRGRWWDRLALNLHQHLKRLEPAIKCIAEGLADPEVRTGHRLALHQRAVRL--RESASCKRFRHLLRGL 683          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: A0A1U7TT00_CARSF (Fanconi-associated nuclease n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A1U7TT00_CARSF)

HSP 1 Score: 60.8 bits (146), Expect = 6.130e-9
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    4 SIFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASML--STRCRSCCRLF 75
            ++ ++R Y P  RGRWW+RL+L+L  H KRL  A+    EGL DP+VR G RLAL +RA+ L  S  CR    LF
Sbjct:  702 NLLSQRIYCPDSRGRWWDRLALNLHQHLKRLEPAIKCITEGLADPEVRTGHRLALYQRAARLRESPGCRKYRHLF 776          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: A0A1U7QZN0_MESAU (Fanconi-associated nuclease n=1 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A1U7QZN0_MESAU)

HSP 1 Score: 59.7 bits (143), Expect = 1.560e-8
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    4 SIFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASML 64
            S+ +++ Y P  RGRWW+RL+L+L  H KRL  A+    EGL DPQVR G RL+L +RA  L
Sbjct:  692 SLLSQKIYCPDSRGRWWDRLALNLHQHLKRLEAAIRCISEGLADPQVRTGHRLSLYQRAVRL 753          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: A0A061I7Y6_CRIGR (Fanconi-associated nuclease n=6 Tax=Cricetulus griseus TaxID=10029 RepID=A0A061I7Y6_CRIGR)

HSP 1 Score: 59.7 bits (143), Expect = 1.560e-8
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    4 SIFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASML 64
            S+ +++ Y P  RGRWW+RL+L+L  H KRL  A+    EGL DPQVR G RL+L +RA  L
Sbjct:  732 SLLSQKIYCPDSRGRWWDRLALNLHQHLKRLDAAIRCISEGLADPQVRTGHRLSLYQRAVRL 793          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: A0A5F5PLV9_HORSE (Fanconi-associated nuclease n=16 Tax=Equus TaxID=9789 RepID=A0A5F5PLV9_HORSE)

HSP 1 Score: 59.3 bits (142), Expect = 2.130e-8
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    5 IFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASML--STRCRSCCRLF 75
            + +++ Y P  RGRWW+RL+L+L  H KRL  A+    EGL DP+VR G RL+L +RA  L  S  CR   RLF
Sbjct:  706 LLSQKVYCPDSRGRWWDRLALNLHQHLKRLEPAIKCITEGLADPEVRTGHRLSLYQRAVRLRESPSCRKYRRLF 779          
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Match: A0A2K5V3I7_MACFA (Fanconi-associated nuclease n=2 Tax=Macaca TaxID=9539 RepID=A0A2K5V3I7_MACFA)

HSP 1 Score: 59.3 bits (142), Expect = 2.140e-8
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    4 SIFTRRRYTPHRRGRWWNRLSLDL-AHAKRLPCALWASQEGLRDPQVRGGDRLALEKRASML--STRCRSCCRLF 75
            S+ ++R Y P  RGRWW+RL+L+L  H KRL   +    EGL DP+VR G RL+L +RA  L  S  C+   RLF
Sbjct:  692 SLLSQRIYCPDSRGRWWDRLALNLHQHLKRLEPTIKCITEGLADPEVRTGHRLSLYQRAVRLRESPSCKKFRRLF 766          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1983.6428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNK2_ECTSI1.080e-2998.25Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
A0A6H5L3R1_9PHAE1.100e-2898.25Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
D3ZVU2_RAT5.040e-1046.84Fanconi-associated nuclease n=5 Tax=Tetrapoda TaxI... [more]
A0A2Y9KBE3_ENHLU1.760e-949.37Fanconi-associated nuclease n=8 Tax=Mustelidae Tax... [more]
UPI00032B258E4.470e-947.50fanconi-associated nuclease 1 n=2 Tax=Ochotona Tax... [more]
A0A1U7TT00_CARSF6.130e-949.33Fanconi-associated nuclease n=1 Tax=Carlito syrich... [more]
A0A1U7QZN0_MESAU1.560e-851.61Fanconi-associated nuclease n=1 Tax=Mesocricetus a... [more]
A0A061I7Y6_CRIGR1.560e-851.61Fanconi-associated nuclease n=6 Tax=Cricetulus gri... [more]
A0A5F5PLV9_HORSE2.130e-848.65Fanconi-associated nuclease n=16 Tax=Equus TaxID=9... [more]
A0A2K5V3I7_MACFA2.140e-848.00Fanconi-associated nuclease n=2 Tax=Macaca TaxID=9... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15749:SF4FANCONI-ASSOCIATED NUCLEASE 1coord: 8..67
IPR033315Fanconi-associated nuclease 1-likePANTHERPTHR15749FAMILY NOT NAMEDcoord: 8..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1983contigEcto-sp13_S_contig1983:14287..14532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1983.6428.1mRNA_Ecto-sp13_S_contig1983.6428.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1983 14287..14532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1983.6428.1 ID=prot_Ecto-sp13_S_contig1983.6428.1|Name=mRNA_Ecto-sp13_S_contig1983.6428.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
MRSSIFTRRRYTPHRRGRWWNRLSLDLAHAKRLPCALWASQEGLRDPQVR
GGDRLALEKRASMLSTRCRSCCRLFTFGPRGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033315Fan1-like