prot_Ecto-sp13_S_contig19828.6424.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19828.6424.1
Unique Nameprot_Ecto-sp13_S_contig19828.6424.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
BLAST of mRNA_Ecto-sp13_S_contig19828.6424.1 vs. uniprot
Match: D8LCI2_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 7.720e-45
Identity = 89/134 (66.42%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    5 WSKRGRCAYQGCPTRAHFGFDGCRKAEFCSRHAKDGMVDFRTKKHGREIISVSEQGLSSEGQRGMMHELFGGGQSVSSQPSPTRTGNGGSSSSSDGTDRFADERAPAADREETAAAAWLFMGLRMKRRVGDDVG 138
            WSKRGR                                 FRTKKHGREIISVSEQG  SEGQRGMMHELFGGGQSVSS P+ T TGN GSSSSS GTDRFADERAPA +REETAAAAWLFMGLRMK+RV DDVG
Sbjct:  116 WSKRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRTKKHGREIISVSEQGPPSEGQRGMMHELFGGGQSVSSGPTSTGTGNRGSSSSSGGTDRFADERAPAEEREETAAAAWLFMGLRMKKRVADDVG 249          
BLAST of mRNA_Ecto-sp13_S_contig19828.6424.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 8.610e-7
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 MVDVWSKRGRCAYQGCPTRAHFGFDGCRKAEFCSRHAKDGMVD 43
            M+ V +K   C + GC TRA+FG  G +KAEFCSRHA+DGMVD
Sbjct:    1 MIHVRAKT--CDHVGCTTRANFGVPGSKKAEFCSRHAEDGMVD 41          
BLAST of mRNA_Ecto-sp13_S_contig19828.6424.1 vs. uniprot
Match: A0A6H5KY67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY67_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 3.790e-5
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    7 KRGRCAYQ-GCPTRAHFGFDGCRKAEFCSRHAKDGMVDFRTKKHG 50
            K  RC  + GC  R  +G DGC+KAEFCS+H+K GM++   K+ G
Sbjct:   22 KGNRCCQEHGCTVRPSYGIDGCKKAEFCSKHSKPGMINLTKKRCG 66          
BLAST of mRNA_Ecto-sp13_S_contig19828.6424.1 vs. uniprot
Match: D7FNJ9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ9_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 7.470e-5
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MVDVWSKRGRCAYQGCPTRAHFGFDGCRKAEFCSRHAKDGMVDFRTKK 48
            MV  + KR  C +  C T+A++G +G +KA+FC+RHA DGMV+   KK
Sbjct:    1 MVRAYKKR-LCGFPSCLTQANYGANGSKKAQFCARHADDGMVNVTAKK 47          
BLAST of mRNA_Ecto-sp13_S_contig19828.6424.1 vs. uniprot
Match: A0A6H5L2L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L0_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 7.630e-5
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MVDVWSKRGRCAYQGCPTRAHFGFDGCRKAEFCSRHAKDGMVDFRTKK 48
            M+  + KR  C +  C T+A++G +G +KA+FC+RHA DGMV+   KK
Sbjct:  351 MIRAYKKR-LCGFPSCQTQANYGANGSKKAQFCARHADDGMVNVTAKK 397          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19828.6424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCI2_ECTSI7.720e-4566.42EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2... [more]
D8LCH9_ECTSI8.610e-760.47EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KY67_9PHAE3.790e-548.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNJ9_ECTSI7.470e-547.92EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L2L0_9PHAE7.630e-545.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19828contigEcto-sp13_S_contig19828:773..1309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19828.6424.1mRNA_Ecto-sp13_S_contig19828.6424.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19828 680..2171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19828.6424.1 ID=prot_Ecto-sp13_S_contig19828.6424.1|Name=mRNA_Ecto-sp13_S_contig19828.6424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
MVDVWSKRGRCAYQGCPTRAHFGFDGCRKAEFCSRHAKDGMVDFRTKKHG
REIISVSEQGLSSEGQRGMMHELFGGGQSVSSQPSPTRTGNGGSSSSSDG
TDRFADERAPAADREETAAAAWLFMGLRMKRRVGDDVGNNPPREVSRSAG
HAAQFGRPMPGSVEPVRDKDGIPVRAGR*
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