prot_Ecto-sp13_S_contig19826.6423.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19826.6423.1
Unique Nameprot_Ecto-sp13_S_contig19826.6423.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length435
Homology
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: A0A6H5KSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE)

HSP 1 Score: 553 bits (1425), Expect = 1.570e-190
Identity = 370/461 (80.26%), Postives = 380/461 (82.43%), Query Frame = 0
Query:    1 WKSHLDNRLASGXXXXXXX---VRAPAGFEEGPILVGEXXXXXXXXA-----------VKGVARRGGLAGSGGGQLRTALGTRTTNARVSTPGRPAGNGVDGGERRPVSGGRRRLETATAYPAVGEA-GGXXXXSCSGSSGVPYPRPSSGSLRPSSSSRNPYDARDHAGRPSAAAADATAAASRRWTARGEYEGAGKQQXXXXXXXXXXXXXXXXXXXXXX---------HSFGVEDLEEDGVADDGVGGPAPVGAAAKERSSYALLGGPPRERPLSATA---TAALAAAPAITTTAADWLSAGEDDYRDGGAVWRDWTAPALAVREAPEAAGAISAPGSLRSGAAATKFSVGDTLGLGEAALGDPAHGRRGGAASAVRGAPGRGLLEGGGVYGTSGGGGGAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGKRAGDAPP 434
            W+SHLDNRLASGXXXXXXX   VRAPAGF EG ILVGEXXXXXXXX            VKGVARRGG+AG GGGQLRTALGTRTTNAR      PAG+GV  GERRPVSGG RRLET+TAYPAVGE+ GGXXXX CSGSSGVPYPRP+SGSLRP SSSRNPYDARDHAGR SAAA +A AAASRRWTARGEYEG GK Q     XXXXXXXXXXXXXXXXX         HSFGVEDLEEDGV DDG  GPAPVGAA KER SYALLGG   ERPLSATA   TAALAAAPAI T AADWLSAGEDDYR G AVWRDWTAPA AV  APEAAGA SAPGS RSGAAATKFS GD  GLGEAALG PAHGRRG A +A RGAPGRGLLEGGGVYGT G   GAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVG+LEQRLTLTEDRLQQG+RAGDA P
Sbjct:  204 WRSHLDNRLASGXXXXXXXXXSVRAPAGFGEGAILVGEXXXXXXXXXXXXXXXXXXXXVKGVARRGGVAGLGGGQLRTALGTRTTNAR------PAGSGVGEGERRPVSGGGRRLETSTAYPAVGESSGGXXXXXCSGSSGVPYPRPASGSLRPPSSSRNPYDARDHAGRSSAAAGEAAAAASRRWTARGEYEGWGKHQPPLPPXXXXXXXXXXXXXXXXXXXXXXXXXXHSFGVEDLEEDGVVDDGPEGPAPVGAAEKERDSYALLGGRQSERPLSATAAAATAALAAAPAIRTGAADWLSAGEDDYRGGAAVWRDWTAPAPAVGAAPEAAGAFSAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRGEAGAAARGAPGRGLLEGGGVYGTGGXXXGAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGLLEQRLTLTEDRLQQGERAGDASP 658          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI)

HSP 1 Score: 430 bits (1106), Expect = 3.890e-142
Identity = 289/445 (64.94%), Postives = 293/445 (65.84%), Query Frame = 0
Query:    1 WKSHLDNRLAS-------GXXXXXXXVRAPAGFEEGPILVGEXXXXXXXXA-VKGVARRGGLAGSGGGQLRTALGTRTTNARVSTPGRPAGNGVDGGERRPVSGGRRRLETATAYPAVGEAGGXXXXSCSGSSGVPYPRPSSGSLRPSSSSRNPYDARDHAGRPSAAAADATAAASRRWTARGEYEGAGKQQXXXXXXXXXXXXXXXXXXXXXXHSFGVEDLEEDGVADDGVGGPAPVGAAAKERSSYALLGGPPRERPLSATATA---ALAAAPAITTTAADWLSAGEDDYRDGGAVWRDWTAPALAVREAPEAAGAISAPGSLRSGAAATKFSVGDTLGLGEAALGDPAHGRRGGAASAVRGAPGRGLLEGGGVYGTSGGGGGAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGKRAGDAPP 434
            W+SHLDNRLAS        XXXXXXXVRAP GFEEG I    XXXXXXXX  VKGVARRGGLAGSGGGQ RTALGTRTTNARVSTPGRPAG+GV GGERRPVSGGRRRLETATAYPA                                                                                                       DLEEDGVADDGVGGPAPVGAAAKER SY LLGG   ERPLSATA A   ALAAAPAI T AADWLSAGEDDYR GGAVWRDWTAPA AV  APEAAGAISAPGS RSGAAATKFS GD  GLGEAALG PAHGRRGGAA+AVRGAPGRGLLEGGGV GT      APRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQG+R  D  P
Sbjct:  335 WRSHLDNRLASVGXXXXXXXXXXXXXVRAPTGFEEGAIXXXXXXXXXXXXXXVKGVARRGGLAGSGGGQPRTALGTRTTNARVSTPGRPAGSGVGGGERRPVSGGRRRLETATAYPA-------------------------------------------------------------------------------------------------------DLEEDGVADDGVGGPAPVGAAAKERDSYELLGGRQSERPLSATAAAGAAALAAAPAIRTAAADWLSAGEDDYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRGGAAAAVRGAPGRGLLEGGGVCGTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGERVADTSP 676          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: A0A7S2CER6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CER6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.820e-8
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
Query:  376 PRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRL 423
            P +   + R  LPE L  TLDHIVGQLD++TRT+ +LEQR++LTEDRL
Sbjct:   58 PSQRGVISRDMLPEVLTATLDHIVGQLDVVTRTMSILEQRVSLTEDRL 105          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: UPI001659BF5B (POC1 centriolar protein homolog A-like isoform X4 n=1 Tax=Halichoerus grypus TaxID=9711 RepID=UPI001659BF5B)

HSP 1 Score: 61.2 bits (147), Expect = 2.390e-8
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  386 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 425
            ++P+ L  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   31 SMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQ 70          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: UPI0007B7EE92 (POC1 centriolar protein homolog A-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B7EE92)

HSP 1 Score: 60.8 bits (146), Expect = 2.800e-8
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  386 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 425
            ++P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L++
Sbjct:   27 SVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLKE 66          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: A0A7J7UDW8_MYOMY (POC1 centriolar protein A n=1 Tax=Myotis myotis TaxID=51298 RepID=A0A7J7UDW8_MYOMY)

HSP 1 Score: 60.8 bits (146), Expect = 2.950e-8
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 0
Query:  378 RSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 425
            +S   +  + P+AL  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   19 QSAPREPASTPQALTSTLEHIVGQLDVLTQTVCILEQRLTLTEDKLKQ 66          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: UPI001659089B (POC1 centriolar protein homolog A-like isoform X3 n=1 Tax=Halichoerus grypus TaxID=9711 RepID=UPI001659089B)

HSP 1 Score: 61.2 bits (147), Expect = 6.360e-8
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  386 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 425
            ++P+ L  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   70 SMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQ 109          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: UPI001659BC96 (POC1 centriolar protein homolog A-like isoform X1 n=2 Tax=Halichoerus grypus TaxID=9711 RepID=UPI001659BC96)

HSP 1 Score: 61.2 bits (147), Expect = 6.670e-8
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  386 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 425
            ++P+ L  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   72 SMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQ 111          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: UPI0007B952DC (POC1 centriolar protein homolog A n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B952DC)

HSP 1 Score: 60.8 bits (146), Expect = 7.340e-8
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  386 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 425
            ++P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L++
Sbjct:   65 SVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLKE 104          
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Match: A0A6P7MMV5_BETSP (POC1 centriolar protein homolog A n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7MMV5_BETSP)

HSP 1 Score: 65.5 bits (158), Expect = 8.040e-8
Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 0
Query:  375 APRRSLEV-----DRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 425
            AP+RS  V       G LP  LAGTL+HI+GQLD+LT+TV +LEQRLTLTED+L++
Sbjct:  395 APQRSPHVHGSRASDGDLPPGLAGTLEHIMGQLDVLTQTVSILEQRLTLTEDKLKE 450          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19826.6423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG1_9PHAE1.570e-19080.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSH2_ECTSI3.890e-14264.94Lissencephaly protein 1-like n=1 Tax=Ectocarpus si... [more]
A0A7S2CER6_9STRA1.820e-860.42Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI001659BF5B2.390e-867.50POC1 centriolar protein homolog A-like isoform X4 ... [more]
UPI0007B7EE922.800e-870.00POC1 centriolar protein homolog A-like n=1 Tax=Sin... [more]
A0A7J7UDW8_MYOMY2.950e-860.42POC1 centriolar protein A n=1 Tax=Myotis myotis Ta... [more]
UPI001659089B6.360e-867.50POC1 centriolar protein homolog A-like isoform X3 ... [more]
UPI001659BC966.670e-867.50POC1 centriolar protein homolog A-like isoform X1 ... [more]
UPI0007B952DC7.340e-870.00POC1 centriolar protein homolog A n=1 Tax=Sinocycl... [more]
A0A6P7MMV5_BETSP8.040e-860.71POC1 centriolar protein homolog A n=1 Tax=Betta sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19826contigEcto-sp13_S_contig19826:1590..3230 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19826.6423.1mRNA_Ecto-sp13_S_contig19826.6423.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19826 1590..3230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19826.6423.1 ID=prot_Ecto-sp13_S_contig19826.6423.1|Name=mRNA_Ecto-sp13_S_contig19826.6423.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=435bp
WKSHLDNRLASGGGGGGGSVRAPAGFEEGPILVGEEKEEEDAAAVKGVAR
RGGLAGSGGGQLRTALGTRTTNARVSTPGRPAGNGVDGGERRPVSGGRRR
LETATAYPAVGEAGGGGGGSCSGSSGVPYPRPSSGSLRPSSSSRNPYDAR
DHAGRPSAAAADATAAASRRWTARGEYEGAGKQQPPPPSSPQQRQRQRQR
QQQQQQHSFGVEDLEEDGVADDGVGGPAPVGAAAKERSSYALLGGPPRER
PLSATATAALAAAPAITTTAADWLSAGEDDYRDGGAVWRDWTAPALAVRE
APEAAGAISAPGSLRSGAAATKFSVGDTLGLGEAALGDPAHGRRGGAASA
VRGAPGRGLLEGGGVYGTSGGGGGAPRRSLEVDRGALPEALAGTLDHIVG
QLDMLTRTVGVLEQRLTLTEDRLQQGKRAGDAPP*
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