prot_Ecto-sp13_S_contig1982.6422.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1982.6422.1
Unique Nameprot_Ecto-sp13_S_contig1982.6422.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length908
Homology
BLAST of mRNA_Ecto-sp13_S_contig1982.6422.1 vs. uniprot
Match: A0A6H5K0L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L0_9PHAE)

HSP 1 Score: 562 bits (1448), Expect = 4.140e-192
Identity = 280/305 (91.80%), Postives = 286/305 (93.77%), Query Frame = 0
Query:  434 MTIPDDQDSRHQSPVFFGYDLVKKPRSRGGALEDHEKPKREDFVVHRKGKSCPVCLVGKPGCPCCWDFPEGYVPHDFAYLGPFEDTSVPRPASRRSSSRSTVDGGGSVSSLPPVGDKIVSTPRTPVAAAAAERVGTGAAASGSPAGRRVSLLMEGMHGVITTDKGEGTDSEEKEKPELHTDLTTRAAITLYRSIVGSIIRIFVKVIPCGTATCLWMDSSWPVSYLFDLWRANAAEGCT------IDAFMCLPTIPGLWNLDNRNLPETDTTLGVHTGNLPLSTYNLTTPKSTVTVLCTTFLSKIK 732
            MTIPDDQDSRHQSPVFFGYDLVKKPRS+GGALEDHEKPKREDFV+HR+GKSCPVCLVGKPGCPCCWDFPEGYVPHDFAYLGPFED+S  RP SRRSS RSTVDG GSVSSLPPVGDK  STPRTP AAAAA+RV TGAAASGSP GRRVSLLM+GMHGVITTDKGEG DSEEKEKPELHTDLTT AAITLYRSIVGS IRIFVKVIPCGTATCLWMDSSWPVSYLFDLWRANAAEGCT      IDAFMCLPTIPGLWNLDNRNLPETDTTLGVHTGNLPLSTYNLTTPKSTVTVLCTTFLSKIK
Sbjct:    1 MTIPDDQDSRHQSPVFFGYDLVKKPRSKGGALEDHEKPKREDFVLHRRGKSCPVCLVGKPGCPCCWDFPEGYVPHDFAYLGPFEDSSASRPTSRRSS-RSTVDGRGSVSSLPPVGDKTGSTPRTPAAAAAADRVETGAAASGSPPGRRVSLLMKGMHGVITTDKGEGADSEEKEKPELHTDLTTSAAITLYRSIVGSTIRIFVKVIPCGTATCLWMDSSWPVSYLFDLWRANAAEGCTCVFMGGIDAFMCLPTIPGLWNLDNRNLPETDTTLGVHTGNLPLSTYNLTTPKSTVTVLCTTFLSKIK 304          
BLAST of mRNA_Ecto-sp13_S_contig1982.6422.1 vs. uniprot
Match: D8LFE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE7_ECTSI)

HSP 1 Score: 566 bits (1459), Expect = 3.420e-187
Identity = 303/365 (83.01%), Postives = 307/365 (84.11%), Query Frame = 0
Query:  135 QQLARRIAKWTQSNQAPQGSTTRAEPWAAXXXXXXXXXXXXXXXXSIVIAPADGVEVRGAVCNTESMGGAAKRTRRRRERQPRRQVDYPEEALAERMAHLLSQRQVAMGNRTKVIKRAQQKAIKAKLAETMYETHKFEEELGGAGQWSSSKRSVELAKLGLEDYHHQCSLVQVGKRPHPEDIHPAFLGYFHQRRSPKGAWDPALRSPVFFGKLSEALTRREAVRGEGNLAALKALMGGGSFDRRSSE-----EESVGQNKSSPSSTCQTFPLAPSTRGKVRQRLREVGTTYDSAGLAHPSCFGLMTIPDDQDSRHQSPVFFGYDLVKKPRSRGGALEDHEKPKREDFVVHRKGKSCPVCLVGKPG 494
            QQLARRIAKWTQSNQAPQGS T AEPWAA                   I PADGVE RG V +T SMGGA KRTRRRR RQPRRQVDY EEAL ERMAHLLSQR     +RTK IKRAQQKAIKAKLAE MYETHKFEEELGGAGQW SSKRSVELAKLGLED    C   QVGKRPHPEDIHPAFLGYFHQRRSPKGAWDPALRSPVFFGKLSEALTRREAVRGEGNLAALKALM G SFDRRSS+     E SVGQN SSP STCQ FPLAP+TRGKVRQRLREVGTTYDSAGL HPSCFGLMTIPDDQDSRHQSPVFFGYDLVKKPRSRGGALEDHEKPKREDFVVHRKGK CPVCLVGKPG
Sbjct:  358 QQLARRIAKWTQSNQAPQGSITGAEPWAAVVTTPPASDDD--------IVPADGVEERGVVRDTVSMGGAGKRTRRRR-RQPRRQVDYAEEALTERMAHLLSQR-----DRTKAIKRAQQKAIKAKLAEMMYETHKFEEELGGAGQWGSSKRSVELAKLGLED----CRSGQVGKRPHPEDIHPAFLGYFHQRRSPKGAWDPALRSPVFFGKLSEALTRREAVRGEGNLAALKALMSGASFDRRSSQGEARQEASVGQNNSSPCSTCQAFPLAPATRGKVRQRLREVGTTYDSAGLVHPSCFGLMTIPDDQDSRHQSPVFFGYDLVKKPRSRGGALEDHEKPKREDFVVHRKGKPCPVCLVGKPG 704          
BLAST of mRNA_Ecto-sp13_S_contig1982.6422.1 vs. uniprot
Match: A0A7S2MF12_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MF12_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.120e-17
Identity = 87/350 (24.86%), Postives = 138/350 (39.43%), Query Frame = 0
Query:  477 VVH----RKGKSCPVCLVGKPGCPCCWDFPEGYVPHDFAYLGPFEDTSVPRPASRRSSSRSTVDGGGSVSSLPPVGDKIVSTPRTPVAAAAAERVGTGAAASGSPAGRRVSLLMEGMHGVITTDKGEGTDSEEKEKPELHTDLTTRAAITLYRSIVGSIIRIFVKVIPCGTATCLWMDSSWPVSYLFDLWRANAAEGCTIDAFMCLPTIPGLWNLDNRNLPETDTTLGVHTGNLPLSTYNLTTPKSTVTVLCTTFLSKIKTRENIERYLVY-ETGLGKQAVLEVFDHLVGCPKRP-ENDPIQKVLCGLMEHRVAQQQLVDNDDDSAEVANRNRVLLDAEKTRKQTALEKK 820
            V+H    R    CP+CLV KPGCP CW+FP+G+ P D+ + G                                                                        +G H ++ T            KP++HTDLTT  A+  +R I  S   + VK IP G    L +  +  V YL  L+R+ +  G    A + +PT+ G++ LDN  +PE++ TL ++T ++ L  Y        V +L    + +I    +  ++L+  +  L  Q   ++  HL G  +    ND +Q+ L  L E ++   + V  DD   E    +  +   E+ RK   L KK
Sbjct:  131 VIHPAWLRPEDICPICLVRKPGCPFCWEFPKGFAPVDYEHKG-----------------------------------------------------------------------KKGEHDLVDT------------KPKIHTDLTTVGALQTFRHINSSYTNVLVKTIPAGPVIELRVLPTDNVGYLHHLFRSKSEFGMHDQARLFIPTVNGIYCLDNDQVPESELTLALYTADIALQRYGFMGEAFPVVLLHA--MGEIGLFHDTFQHLIERQVHLPTQPKTDIIHHLEGLVEITIGNDALQESLLQLFEKQLTLDRKVAQDDLDEEAKELHEKMHAEEEMRKAMELRKK 395          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1982.6422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K0L0_9PHAE4.140e-19291.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFE7_ECTSI3.420e-18783.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2MF12_9STRA4.120e-1724.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1982contigEcto-sp13_S_contig1982:203..12513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1982.6422.1mRNA_Ecto-sp13_S_contig1982.6422.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1982 176..12852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1982.6422.1 ID=prot_Ecto-sp13_S_contig1982.6422.1|Name=mRNA_Ecto-sp13_S_contig1982.6422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=908bp
MSHTSGRWDSFTIEGTKQRLNLTPGALTDFAEHLILEARDIGQNVTSVTS
RDDGSSTSVGVEGVSVEYEEFCTLYNMYLSTQEGLWRARDLLTTGFLSKE
EYESMLERQAVDDQRRRRLRKMLKTRRENKERKRQQLARRIAKWTQSNQA
PQGSTTRAEPWAAVVTTPPASDDDGGSGGSIVIAPADGVEVRGAVCNTES
MGGAAKRTRRRRERQPRRQVDYPEEALAERMAHLLSQRQVAMGNRTKVIK
RAQQKAIKAKLAETMYETHKFEEELGGAGQWSSSKRSVELAKLGLEDYHH
QCSLVQVGKRPHPEDIHPAFLGYFHQRRSPKGAWDPALRSPVFFGKLSEA
LTRREAVRGEGNLAALKALMGGGSFDRRSSEEESVGQNKSSPSSTCQTFP
LAPSTRGKVRQRLREVGTTYDSAGLAHPSCFGLMTIPDDQDSRHQSPVFF
GYDLVKKPRSRGGALEDHEKPKREDFVVHRKGKSCPVCLVGKPGCPCCWD
FPEGYVPHDFAYLGPFEDTSVPRPASRRSSSRSTVDGGGSVSSLPPVGDK
IVSTPRTPVAAAAAERVGTGAAASGSPAGRRVSLLMEGMHGVITTDKGEG
TDSEEKEKPELHTDLTTRAAITLYRSIVGSIIRIFVKVIPCGTATCLWMD
SSWPVSYLFDLWRANAAEGCTIDAFMCLPTIPGLWNLDNRNLPETDTTLG
VHTGNLPLSTYNLTTPKSTVTVLCTTFLSKIKTRENIERYLVYETGLGKQ
AVLEVFDHLVGCPKRPENDPIQKVLCGLMEHRVAQQQLVDNDDDSAEVAN
RNRVLLDAEKTRKQTALEKKRGQVAYGSKEWKTEQRALRQKEAEAASLLA
GGEANTAHAIVTPHVGGVKADERGNVGGGLARGAAAAIGGKLSKLNLSFR
ASAKKLF*
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