prot_Ecto-sp13_S_contig19800.6418.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19800.6418.1
Unique Nameprot_Ecto-sp13_S_contig19800.6418.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length365
Homology
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 652 bits (1683), Expect = 1.060e-228
Identity = 341/366 (93.17%), Postives = 349/366 (95.36%), Query Frame = 0
Query:    1 NLDEDYGAENGRERSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDDSHSSGAWKVVYLDLAARQRTPPAPPPPSKDFPPLDSSRRSNSYKFQRIQVTSMSATSAPRNLPWSSAINSDSSSKEMQGILDLPYKKALHGSGKAEGGRRRRGPGGKGARGPREGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDTVPDL-RRPPPGVA-DVKARHSPFPSSARPNSRRSSMCLGKLATRRSHCRLIL 364
            NLDED GAENGRER SRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLP+RLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHD +HSS AWKVVYLDL+ARQRTPPAPPPPSKDFPPLDSSR SNSYKFQRIQVTSMSATSAPRNLPWSSA  SDSSS+EMQG+LDLPYKKAL+GSGK EGGRRRRG  GKGARGPR GAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGED  PDL RRPPP VA DVKAR SPFPSSARP+SRRSSMCLGKLATRRSHCRL+L
Sbjct:  442 NLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSA--SDSSSEEMQGVLDLPYKKALNGSGKPEGGRRRRGSAGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 805          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A7S0E9R5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E9R5_9CRYP)

HSP 1 Score: 77.8 bits (190), Expect = 4.350e-12
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   24 FDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVR-PGSPLLEAL 126
            F++  +  G+LWN+QMYIDGYVP++++ Y+ R++P    IV W++         L++PV   P L    ACL M+P T      +P+  Q L+R P S L + L
Sbjct:  326 FNIPDYFEGLLWNIQMYIDGYVPDYFYTYNFRFAPDAKSIVKWIESEDFGPFPELSIPVSDCPALQPLHACLAMMPSTS--PEHVPKAYQALIREPSSRLYQVL 427          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A7S4J905_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4J905_GUITH)

HSP 1 Score: 70.9 bits (172), Expect = 3.620e-10
Identity = 42/148 (28.38%), Postives = 72/148 (48.65%), Query Frame = 0
Query:   24 FDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLV-RPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELS-EFHDDSHSSGAWKVVY 169
            F++  +   +LWN+QMYIDGYVP++++ Y+ +++P    IV W++         L +P      L    ACL M+P T     F+P+  Q L+  P S L + L     S   D+ + L     +  + L+ E    +  +G W + +
Sbjct:  136 FNIPDYFESLLWNIQMYIDGYVPDYFYTYNFKFAPDAKSIVKWIESEDFAPFPELNIPYSECRALQPLHACLAMMPSTS--PEFVPKAYQSLICEPSSRLYQVLNVD--SKDFDVPEFLDIMNTIDGRLLTPEEEIQTRDNGCWSIFF 279          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A4D9CTZ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTZ4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.950e-10
Identity = 52/174 (29.89%), Postives = 89/174 (51.15%), Query Frame = 0
Query:   23 LFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLAN--LAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDDSHSSGAWKVVYLDLAARQRTPPAPPPPSKDFPPLDS 194
            LFD E +L G+LWN+QMY+DGY P++ + Y  R++PS   +  +++  +++  ++  L+VP    PPL  ++ACL ++P    G   +PE L  ++   + + +  E  G +  L          NL+   ++  H   H   +    + ++ A   TP A P PS  FPP  S
Sbjct:  160 LFDEEQYLRGLLWNVQMYVDGYCPDYQYAYRHRFAPSAQCLADFIRNQTKNNASSFALSVPTSLTPPLHPALACLAVMPRW--GLHLVPENLSSVLESSARVNKMYE-TGAAFSL----------NLLMDTVNSSHP--HLVRSQNFHWTEIKAN--TPCASPTPSS-FPPSSS 315          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: W7T206_9STRA (Exoribonuclease 2 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T206_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.240e-10
Identity = 46/166 (27.71%), Postives = 85/166 (51.20%), Query Frame = 0
Query:   23 LFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLAN--LAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQEL--SEFHDDSHSSGAWKVVYLDLAARQRTPPAPPP 184
            LFD E +L G+LWN+QMY+DGY P++ + Y  R++PS   +  +++  +++  ++  L+VP    PPL  ++ACL ++P    G   +PE L  ++   + + +  E  G +  L++  ++ T  +  P  +    FH        W  +  +      TP + PP
Sbjct:   27 LFDEEQYLRGLLWNVQMYVDGYCPDYQYAYRHRFAPSAQCLADFIRNQTKNNASSFALSVPTSLTPPLHPALACLAVMPRW--GLHLVPENLSSVLESSARVNKMYE-TGAAFSLNL--LMDTVNSSHPHLVRSQNFH--------WTEIKANTPCASPTPSSSPP 179          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A7S3EG98_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EG98_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 2.780e-8
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   24 FDVESFLLGVLWNLQMYIDGYVPN--FYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALEWR 129
            +DVE+++ G+LWN+QMYIDGY P+  FY+R+  +Y+P    ++ +     +     + +PV   P + + +A   MLP      S  P RLQPLV+ G+ + + +E R
Sbjct:   83 YDVETYIKGLLWNMQMYIDGYPPDQLFYYRF--KYAPPVDAVLDF--FLEKGMYTQVDLPVSNRPAITSQLALTLMLP--SAAWSLAPGRLQPLVKSGASISDFVEVR 184          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A433QGS0_9FUNG (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QGS0_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 2.800e-8
Identity = 76/273 (27.84%), Postives = 120/273 (43.96%), Query Frame = 0
Query:   18 KGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPP---LPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALEWRGVSSGLDIAKI----------LKTCQNLMPQELSEFHDDSHSSGAWKVVYLDLAARQRTPPAPPPPSK--DFPPLDSSRRSNSYKFQRIQVTSMSATSAPRNLPWSSAINSDSSSKEMQGILDLPYKKALHG-SGKAEGGRRRRGPG-GKGARGPREG 273
            +  +P+FDV ++L G+LWNL MY +G  P+F + Y  R +PS   I+ WV    E     L   +I  P    LP S     +L + +RG  +L      L+   + L+ A+     S G  +A +          L     L+   L EF + S        V+     R+   P P PPS+  D+P L    R ++ KF+ +  T       P++      I+++    E       P++K   G + + +GG + RG G G+G RG R G
Sbjct:  423 ESSSPMFDVRTYLEGLLWNLTMYAEGRCPDFKYTYRYRMAPSPRQILEWVN-EREKAAGTLVGQLITCPQSSQLPFSPLLCALLVLPERGNIYLHSSFSTLLTTHAALITAIVASQGSDGGALATLSAAISAIHSTLSPTDRLLLTPLFEFRNPS--------VWWQSLLREHDIPMPIPPSEAGDWPAL---ARGSNIKFKDVVKT------VPQDATAMGWIDAERLRVEAIQAGAWPFRKIFGGGTHRIDGGYQGRGQGRGRGYRGARRG 677          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A7S0BRQ1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BRQ1_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 5.480e-8
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   21 TPLFDVESFLLGVLWNLQMYIDGYVPN--FYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALE 127
            T  +DVE +L G+LWNLQMYIDGY P+  FY+R+  RY+P    ++ +          NL  PV   P + + +A   MLP      S  P  LQPLV+ G+ + + +E
Sbjct:  121 TGNYDVEMYLKGLLWNLQMYIDGYPPDQQFYYRF--RYAPPVDAVLEYFLEKGTSTQVNL--PVSNRPAITSQLALTLMLP--SAAWSLAPGLLQPLVKSGASINDFVE 223          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A7S2ZT58_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT58_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 1.010e-7
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   24 FDVESFLLGVLWNLQMYIDGYVPN--FYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALEWR 129
            +DVE+++ G+LWN+QMYIDGY P+  FY+R+  +Y+P    ++ +     +     + +PV   P + + +A   MLP      S  P RLQPLV+ G+ + + +E R
Sbjct:  342 YDVETYIKGLLWNMQMYIDGYPPDQLFYYRF--KYAPPVDAVLDF--FLEKGMYTQVDLPVSNRPAITSQLALTLMLP--SAAWSLAPGRLQPLVKSGASISDFVEVR 443          
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Match: A0A7S2ZT80_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT80_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 1.030e-7
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   24 FDVESFLLGVLWNLQMYIDGYVPN--FYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPERLQPLVRPGSPLLEALEWR 129
            +DVE+++ G+LWN+QMYIDGY P+  FY+R+  +Y+P    ++ +     +     + +PV   P + + +A   MLP      S  P RLQPLV+ G+ + + +E R
Sbjct:  361 YDVETYIKGLLWNMQMYIDGYPPDQLFYYRF--KYAPPVDAVLDF--FLEKGMYTQVDLPVSNRPAITSQLALTLMLP--SAAWSLAPGRLQPLVKSGASISDFVEVR 462          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19800.6418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KZW9_9PHAE1.060e-22893.17XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S0E9R5_9CRYP4.350e-1237.50Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S4J905_GUITH3.620e-1028.38Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A4D9CTZ4_9STRA5.950e-1029.89Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7T206_9STRA6.240e-1027.71Exoribonuclease 2 (Fragment) n=1 Tax=Nannochlorops... [more]
A0A7S3EG98_9RHOD2.780e-835.19Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A433QGS0_9FUNG2.800e-827.84XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
A0A7S0BRQ1_9RHOD5.480e-838.53Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZT58_9RHOD1.010e-735.19Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZT80_9RHOD1.030e-735.19Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19800contigEcto-sp13_S_contig19800:207..1606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19800.6418.1mRNA_Ecto-sp13_S_contig19800.6418.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19800 207..1606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19800.6418.1 ID=prot_Ecto-sp13_S_contig19800.6418.1|Name=mRNA_Ecto-sp13_S_contig19800.6418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp
NLDEDYGAENGRERSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYW
RYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPM
TDRGKSFLPERLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQ
ELSEFHDDSHSSGAWKVVYLDLAARQRTPPAPPPPSKDFPPLDSSRRSNS
YKFQRIQVTSMSATSAPRNLPWSSAINSDSSSKEMQGILDLPYKKALHGS
GKAEGGRRRRGPGGKGARGPREGAAPPKSAAWRKKSSAPRIRKSGKAGEG
SDARRGTNGRGEDTVPDLRRPPPGVADVKARHSPFPSSARPNSRRSSMCL
GKLATRRSHCRLIL*
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